Gene Tneu_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1808 
Symbol 
ID6164396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1587333 
End bp1588619 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content64% 
IMG OID641668972 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_001795172 
Protein GI171186253 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.39064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.563323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC TCAAGCTCGT AAGGGGGAAA GTCGACGAGG CCATAGCCGT TAGAACCGTG 
GTGGAGAACT ACATGGCGAG GTTCGCCAAC GACGAAATAA CCGTCTTTAA GAGCTGGAGG
ACGGAGAGCC TCTACCTCCG CCTCGCCAAG GGGAGGAAGA CGGCCCTTCT AGGCTTCACT
GGCCCCGTCG ATCTAAGGGA GGTAGATAGG GCCGTCTCCC GGATGCCCTC TCTCCCCGAC
GACCCGCTGT ATGTGCCGGC GGCGGGGGCC AAGCCCCCGA GCCGCGCCGA GCCGCCGGAG
GACTTCGAGA GGATTCCAGA TCTGGTGAAG AGGGCTATAG ACGCGGCCGA GGGGGCGGAG
AGGAGCGCGG GGGTTGTCCA CTTGACATAC GTCCAGAAGT GGTACGAGGA CACGGCGGGA
GGCGAGGGTC ACTACGCCGT CAACAGGGTA TACATGACGG TTAGGTCCTT CCTAGGGGAG
CTAGCCGCCA CAAGCGCCGC GGCCGGCAGA AGGCTTTCGG AAATAGACGC AGACGCAGTC
GGCGCGGAGA ACTCGCGCCT CCTCTCCATA GCCAAGGGCC TCCCCAGAAC GCGCCTGGAG
CCCAGCGTTG CAGACCTCCT GCTCTCGCCC CTGGTGCTGG GCCACCTCAT GGGGGAGGTG
GTGCAGACGT GGGCGAACGG CCTCGACGTC TTGGCCGGAA GCTCCAGATA CGGCAGAGGG
GACCTGGGCA GGGAGGCGGC TGCCCCCGTC CTCACCCTTG TCGAGGAGAG CCACAACCCG
TCGGTCTACG GCTACACGCC CTTCGACTTC GAGGGGCTGG CCCCCAGGCC GGTGGAGATC
TACAGACGGG GGACGCTGAG CGGCTTCATC CACACTAGGG GGACCGCGGC CGCGTTAGGC
ATGGAGCCGA CCGGCCACGC CCTATACGGC TGGGCTAGGC CGGCGCCGGG GCATATATGG
GTGGCGCCGG GGGACGGGCC GGACGACCTA GAGGCCCTCT TTGTAGATCT GGGCAACGGC
GTGTACATAC ACAACAACTG GTACACCCGC TTCCAAAACG TAAAGCTTGG CCAGTTCTCG
ACGGTGGGGA GAGACGTCGC GTTGTTGATA AAGGGCGGAA GGCCCACCGC CTCCGTCAAA
TACGTCAGGT TGGCGGACAC CCTCGAGAGG GTTGTAAAGG GCGTCGCGGA GCTGTCGAAA
ACCGCGAGGC AGATCTACTG GTGGGACATG CCCACGCCGG CCAACGCCCC CTACGCCGTT
GTCCGCTCCA TTGCCGTAAC TACCTGA
 
Protein sequence
MTLLKLVRGK VDEAIAVRTV VENYMARFAN DEITVFKSWR TESLYLRLAK GRKTALLGFT 
GPVDLREVDR AVSRMPSLPD DPLYVPAAGA KPPSRAEPPE DFERIPDLVK RAIDAAEGAE
RSAGVVHLTY VQKWYEDTAG GEGHYAVNRV YMTVRSFLGE LAATSAAAGR RLSEIDADAV
GAENSRLLSI AKGLPRTRLE PSVADLLLSP LVLGHLMGEV VQTWANGLDV LAGSSRYGRG
DLGREAAAPV LTLVEESHNP SVYGYTPFDF EGLAPRPVEI YRRGTLSGFI HTRGTAAALG
MEPTGHALYG WARPAPGHIW VAPGDGPDDL EALFVDLGNG VYIHNNWYTR FQNVKLGQFS
TVGRDVALLI KGGRPTASVK YVRLADTLER VVKGVAELSK TARQIYWWDM PTPANAPYAV
VRSIAVTT