Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1806 |
Symbol | |
ID | 6164429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1585902 |
End bp | 1586642 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641668970 |
Product | ABC transporter related |
Protein accession | YP_001795170 |
Protein GI | 171186251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.944964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTCTG GGCTCTTGTT GCAGGCTAGC GGGGTGGTCA AAAAGTTCGG AGGCCTTACC GCCCTAGACG GCGCCTCTAT TTCCGTACCA CAGAACTCTT TTGTCATCTT GGCCGGCCCA AACGGCTCTG GAAAAACCAC CTTGCTCAAC GTGATCTCGG GCCTCTATAG GCCCGACGGC GGCAAGGTGC TCTACCAGGG CTTGGATATA ACACATGCGA GGCCCTACGA GCGGGCGCGG CTGGGAATAG TTAGGACTTT CCAAACGCCT AGGGTAGCGA CAAAGATGTC TGTTTTAGAC AACGTGATTT TTGGGCACAT CTCAGCCGAT GCTCCGTTCG AATTCGGTTG GGCGAGGCGG GAGGGGGAGC TGGTGGAGAA GGCGTTTAAG GTCCTCAAGG TTGTGAAGCT TGACCACATG TGGGACAGGG CGGCGGGGGA GCTCAGCGGG GGGCAACTAA AGCTTCTTGA AATCGCGAGG GCCTTGATGG CTGACGCGAA GCTGATATTG ATGGACGAGC CGGGGGCCGG CCTCAACCCC ACCCTCGCCC ACGAGCTGTT TAAGCTGATG CGCGAGCTCA CCCAGCGGGG CCACACGCTT CTCGTCGTTG AACACAGGCT GGATATAGCG GCGGAGTACG CAGACTACAT GTACGTTCTC TACAACGGGC GGGTTCTGGC AGAGGGGAGG CCCGGCGAGG TGCTCTCCGA CCCCCGGGTT GTCCAGGCGT TTCTAGCATG A
|
Protein sequence | MPSGLLLQAS GVVKKFGGLT ALDGASISVP QNSFVILAGP NGSGKTTLLN VISGLYRPDG GKVLYQGLDI THARPYERAR LGIVRTFQTP RVATKMSVLD NVIFGHISAD APFEFGWARR EGELVEKAFK VLKVVKLDHM WDRAAGELSG GQLKLLEIAR ALMADAKLIL MDEPGAGLNP TLAHELFKLM RELTQRGHTL LVVEHRLDIA AEYADYMYVL YNGRVLAEGR PGEVLSDPRV VQAFLA
|
| |