Gene Tneu_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1806 
Symbol 
ID6164429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1585902 
End bp1586642 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID641668970 
ProductABC transporter related 
Protein accessionYP_001795170 
Protein GI171186251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.944964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTG GGCTCTTGTT GCAGGCTAGC GGGGTGGTCA AAAAGTTCGG AGGCCTTACC 
GCCCTAGACG GCGCCTCTAT TTCCGTACCA CAGAACTCTT TTGTCATCTT GGCCGGCCCA
AACGGCTCTG GAAAAACCAC CTTGCTCAAC GTGATCTCGG GCCTCTATAG GCCCGACGGC
GGCAAGGTGC TCTACCAGGG CTTGGATATA ACACATGCGA GGCCCTACGA GCGGGCGCGG
CTGGGAATAG TTAGGACTTT CCAAACGCCT AGGGTAGCGA CAAAGATGTC TGTTTTAGAC
AACGTGATTT TTGGGCACAT CTCAGCCGAT GCTCCGTTCG AATTCGGTTG GGCGAGGCGG
GAGGGGGAGC TGGTGGAGAA GGCGTTTAAG GTCCTCAAGG TTGTGAAGCT TGACCACATG
TGGGACAGGG CGGCGGGGGA GCTCAGCGGG GGGCAACTAA AGCTTCTTGA AATCGCGAGG
GCCTTGATGG CTGACGCGAA GCTGATATTG ATGGACGAGC CGGGGGCCGG CCTCAACCCC
ACCCTCGCCC ACGAGCTGTT TAAGCTGATG CGCGAGCTCA CCCAGCGGGG CCACACGCTT
CTCGTCGTTG AACACAGGCT GGATATAGCG GCGGAGTACG CAGACTACAT GTACGTTCTC
TACAACGGGC GGGTTCTGGC AGAGGGGAGG CCCGGCGAGG TGCTCTCCGA CCCCCGGGTT
GTCCAGGCGT TTCTAGCATG A
 
Protein sequence
MPSGLLLQAS GVVKKFGGLT ALDGASISVP QNSFVILAGP NGSGKTTLLN VISGLYRPDG 
GKVLYQGLDI THARPYERAR LGIVRTFQTP RVATKMSVLD NVIFGHISAD APFEFGWARR
EGELVEKAFK VLKVVKLDHM WDRAAGELSG GQLKLLEIAR ALMADAKLIL MDEPGAGLNP
TLAHELFKLM RELTQRGHTL LVVEHRLDIA AEYADYMYVL YNGRVLAEGR PGEVLSDPRV
VQAFLA