| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1682 |
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| Symbol | |
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| ID | 6165226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1478244 |
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| End bp | 1478993 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641668847 |
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| Product | proliferating cell nuclear antigen PcnA |
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| Protein accession | YP_001795050 |
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| Protein GI | 171186131 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.950147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.718796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC ACGTCATAAC CTATCTAGAT GCCAAGGAAT TCGCCTACAT CGTCGACGCC
GTTTCCGTGT TGGTGGAGGA GGCCAACTTC GTCGTTAGAA GCGACGGTCT CTACTTGAGG
GCCTTAGACC CGTCGAGGAC CGCCATGGTT GACCTCTCCA TACCTAAGGA GGCGTTCGAC
GAGTTTCCAG AGGTCGAGGA GCTGCGGGTG GGGGTCAACT TCAAGGACCT CAAGAAGATC
CTCAGGCGCG TCAAAAAAGG CGACAAGATC TCCATGGAGG TGGAGGAGGG GAGGATAAGG
ATCAAGCTGG TGGGCAAGTC CGTGAGGTCG ATAACCCTGC CCTCGATAGA GGTGGTGGGG
GAGGAGCTCC CAACGCCTAA GGTGGTGTAT ACGGCGATGG TGAAAACCGC AAGCGACGTC
TTAGCTTCGG CGATAAAAGA CGCAGACGCC GTGGCGGACG AGGTGAAGTT CGAGGCTAAC
GAGGAGGCGC TGGTGATAGG GGCGACGAGC GACAAGGGAG AGGTGGAGGT GAGGCTCGAC
AAAAACAGCG AGCTGGTCTA CGAGTTCGAC GTGAAGGAGC CGGCGTCTGC CAGGTACTCG
CTGGAGTACC TCGTGGACAT GGTGGGGAGG ACGTCGAAGA TCAGCGACAT AGTGACCATC
GAGCTTGCCA CAGCCAAGCC GCTGTTGCTC ACCTTCGACA TACCGGCCGG CGGCAAGATA
GCCTACTTCC TAGCCCCAAG GGTGGAGTGA
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| Protein sequence | MSKHVITYLD AKEFAYIVDA VSVLVEEANF VVRSDGLYLR ALDPSRTAMV DLSIPKEAFD
EFPEVEELRV GVNFKDLKKI LRRVKKGDKI SMEVEEGRIR IKLVGKSVRS ITLPSIEVVG
EELPTPKVVY TAMVKTASDV LASAIKDADA VADEVKFEAN EEALVIGATS DKGEVEVRLD
KNSELVYEFD VKEPASARYS LEYLVDMVGR TSKISDIVTI ELATAKPLLL TFDIPAGGKI
AYFLAPRVE
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