| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0578 |
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| Symbol | |
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| ID | 6164759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 528753 |
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| End bp | 529664 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641667731 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001793966 |
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| Protein GI | 171185047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0010415 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0764761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTGG TAGTTAAGGA GCACGGGGTG TCGCTGGGCT ACAGCAGGTG GGCCCTGGTG
GTGAGGAGGA GGGGCGGGGC CGCCGAGAGG ATCCCCATAC ACCAAGTGGA CAGGCTGTGG
ATCCTCACTG GGGGCGTCTC CATCTCGTCT AGGCTAGTGA GGGCCCTGGC GAGGAGCTTC
GTAGATGTGG TGTTTTTCGA CGGCAGAGGC AACCCCGCGG CTAGGCTGTT TCCGCCTGAG
GCAAACGGCA CGGTTGCACA CCGGCGGGCT CAGTACGAGG CCTACCTAAA CGGCAGGGGG
CTCGAGCTGG CCAAGCTGGT GGTGTATGGA AAGATCGTGA ACCAAGCGGC GGCGCTTAGG
AGAGCCGGCT TGTGGAGGAG GGAGCTGTAC CAAGAGCTCG CGGGGGCTGC GTCTAGGGTG
GCAGAGGCGG CGGCCGCGGT CCCCCGGTGC GGAGACCCAC AGTGCGTCCT CGGCCACGAG
GGGCGCGCCG CGGCTGAGTA CTGGGCCGCC CTCTCAAAGG CCTTTGGGAC CCCCACGAGA
GATCCAAACG CCTCCGACCC CTTCAACCTC GCGCTTAACT ACGGCTATGG GATACTCCGC
TACGCCGTGT GGAGACAGGC AGTTATCCAC GGCCTCGACC CCTACGCCGG CTACCTTCAC
GTGGATAAGT CGGGGAGGCC CTCCCTAGTG CTGGACCTAA TGGAGGAGTT CAGACCCCAC
ATAGACCTCA TGGTGCTCAA GGCCAAGCCC TCCGCAGACT GGCTAGAGGG CGGGGTCTTG
AAGCGGGAGG CCAGGGCGGC GCTGGTGGAG AAGTGGCTCG AGATGAGGCT CGAGCCCACC
ATAGCGAGGC AGGTGGGGCT GGCGGTGGCC CACCTAGAGG GCAGGGGGGT ATACACGCCG
CATAAGCTAT GA
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| Protein sequence | MEVVVKEHGV SLGYSRWALV VRRRGGAAER IPIHQVDRLW ILTGGVSISS RLVRALARSF
VDVVFFDGRG NPAARLFPPE ANGTVAHRRA QYEAYLNGRG LELAKLVVYG KIVNQAAALR
RAGLWRRELY QELAGAASRV AEAAAAVPRC GDPQCVLGHE GRAAAEYWAA LSKAFGTPTR
DPNASDPFNL ALNYGYGILR YAVWRQAVIH GLDPYAGYLH VDKSGRPSLV LDLMEEFRPH
IDLMVLKAKP SADWLEGGVL KREARAALVE KWLEMRLEPT IARQVGLAVA HLEGRGVYTP
HKL
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