| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0397 |
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| Symbol | |
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| ID | 6164715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 358429 |
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| End bp | 360675 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641667555 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001793791 |
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| Protein GI | 171184872 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0559685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.676947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTAAGG CGTACCTCAT ACACATATCT GGCATAGTCC AGGGGGTCGG CTTTAGGCCG
TACGTCAAAA TCCTAGCTGA CCGGCTGGGC CTCGGCGGCT ATGTGAAGAA CCTCGGCGGG
GGGGAGGTGG AGATATACGT CGAGGGGGAG AGGAGCGGGG AGTTCTTGGA CGCGCTTCTA
AACGGGCGGC CTAAGGCCAT CTACATCGAG GAGGTGAAGG CCGTGGAGGT GGAGCCCAGG
GGGGCTAGGG CGTTTGTCAT CGAGAAGAGC TCGGAGGAGG TGCAGACGCC CTCCATGATC
CCCCCCGACT TGGCCATATG TGAGGACTGC CTCAGGGAGG TGTTGGGGGG AGGCGGGAGG
CGGGGGCGGT ACCCCTTCAA CTCCTGTAGC TTCTGCGGGC CGAGGTTCTC CGTCATCAGG
AGGTTGCCCT ACGACAGGGA GAACACCAGC TGGTCGGCTT TTCCGATGTG TGAGGAGTGC
GCCAGGGAGT ACAGTAGCGC TGAGGTGGGC GGCGTGAGGC GCTTCTTCTA CCAAGGCATC
TCCTGTAGAA ACGACGGGCC TCGGCTCACG TTGCTCGACT CAGCTGGGAG GCCGGTGGAG
GCGGAGGACC CGATATCTGA GGCGGCCCGC CTGGTGGAGG AGGGCCGCAT CGTGGCTGTG
AAGGGGGTCG GGGGGTTCCA CATCTTCGCC CTCGCCAGCG ACGACGGGGT CGTGGCGGAG
CTTAGGAGGA GGAAGAGGAG GCCCAGCCAG CCCTTCGCAG TCATGGCGCT CGACCTAGAG
ACCGCGGGGC GGCTCGTCGT GGTCGACGGG GCGGCCGCGG AGCTACTCAC GTCGCCTAGG
AGGCCGGTGG TCCTGTTGCC CAAGAGAGAC GGCAGCCCCG CCTCTCCCCT GGTCTCGCCC
GGCCTAGACA GGGAGGGGGT TTTCCTCCCC TACACGGCGC TCCACTACCT CCTCCTGTCG
GAGATTAGGG ATAGGTTCGC CATAGCCACC AGCGGGAACA TACACGGCGA GCCCATGTGT
ACAGACCGGA GGTGCGTCTT GAGGCTGGGC GTGGCCGACT ACGTGCTGGA CCACGACCTC
GAGATCGTCC ACAGGGTGGA CGACAGCGTG GTGAGGTTCA CGGCGGGTAG GCCCGTGTTG
CTGAGGAGGG GGAGGGGCTA CGCGCCCGTC TGGGTGAAGA TGCCCCTCCG CCTCGGCAGA
GCGGCCGTGG CCTTCGGCGC CGATCTGCAG ACGGCGGGCG CCGTGGGGGT TGGGGACAAG
GCCGTCTTGA CCCAGTACAT CGGCGATCTA GACAGCTTCA GAGCGCTTGA GGACCTCGAC
CGGGAGCTCC GTTGGTTGGC CCAGGCTTAT AGGGCCGAGG CCCCGGCCCT CGTCTGCGAC
CTAAACCCGG CCTACAGCTC CCACAGGCTG TGTAGGGAGT GGGCTGGGGA GCTAAACGCC
GAGGTGTACA CAGTCCAGCA CCACCACGCC CACGCGCTAG CCGCCGCGGC CGACGTAGGC
GTGGCCGAGC CCTTCCTGGC CGTGGCCATA GACGGCGTGG GGCTTGGAGA AGACGGCGCG
GCGTGGGGGG GCGAGGTGCT CTACGTAGAG GGGCCGAGGT ACGAGCGGGT CCGCCACCTG
ACCTACGTCC CCATGCCGGG GGGCGACCTC GCCGCCGTGA GGCCGGCCCG GATGGCGCTG
GCCTACCTGT TTAAACACTT CGGCGAGGAC TGGGGCCTCG TGGAGAGGCT GAAGCTGGCC
GGGAGGCTCC CCGGCGGCTT AGCCGAGGCC CAGATCGCGG CGAGGGAGAT CAAGAGCCCC
CGGATATACA CCTCCAGCGT GGGGAGGTTC CTAGACGCGG TGGCGGCGGC CCTCGGCGTG
GCGTGGGAGA GGACATACGA AGGCGAGCCG GCGATTAGGC TTGAGGCGGC TGCGTCCGGC
GGGAGGCTTC TCCAGCTCGA CGCGGAGGAC CAGGTGGAGC TGTTCGGCCG CCTTGTGGAG
CTTTACCTAA GAGGCGCCGA TGTAAAAGAC CTTGCATATA CAGCCCAGTA TAAGCTGGGG
CAGATCCTCG GCAAGTGGGC TTGCGAGACG GCGGAGAGGA AGGGCGTAAG ACATATAGTG
GTCGGAGGCG GAGTTGCCGT AAATGATTAC ATAATCGCCG GGCTGGAGTC GGTATGTGGA
AGAGCGGCTC TCCCGTCGAA GACGCCGCCT GGCGACGGAG GCATAGCCCT CGGCCAGCTG
TACTACCTTG CCCACCTTGG AATATAG
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| Protein sequence | MPKAYLIHIS GIVQGVGFRP YVKILADRLG LGGYVKNLGG GEVEIYVEGE RSGEFLDALL
NGRPKAIYIE EVKAVEVEPR GARAFVIEKS SEEVQTPSMI PPDLAICEDC LREVLGGGGR
RGRYPFNSCS FCGPRFSVIR RLPYDRENTS WSAFPMCEEC AREYSSAEVG GVRRFFYQGI
SCRNDGPRLT LLDSAGRPVE AEDPISEAAR LVEEGRIVAV KGVGGFHIFA LASDDGVVAE
LRRRKRRPSQ PFAVMALDLE TAGRLVVVDG AAAELLTSPR RPVVLLPKRD GSPASPLVSP
GLDREGVFLP YTALHYLLLS EIRDRFAIAT SGNIHGEPMC TDRRCVLRLG VADYVLDHDL
EIVHRVDDSV VRFTAGRPVL LRRGRGYAPV WVKMPLRLGR AAVAFGADLQ TAGAVGVGDK
AVLTQYIGDL DSFRALEDLD RELRWLAQAY RAEAPALVCD LNPAYSSHRL CREWAGELNA
EVYTVQHHHA HALAAAADVG VAEPFLAVAI DGVGLGEDGA AWGGEVLYVE GPRYERVRHL
TYVPMPGGDL AAVRPARMAL AYLFKHFGED WGLVERLKLA GRLPGGLAEA QIAAREIKSP
RIYTSSVGRF LDAVAAALGV AWERTYEGEP AIRLEAAASG GRLLQLDAED QVELFGRLVE
LYLRGADVKD LAYTAQYKLG QILGKWACET AERKGVRHIV VGGGVAVNDY IIAGLESVCG
RAALPSKTPP GDGGIALGQL YYLAHLGI
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