Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0112 |
Symbol | |
ID | 6166226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 95877 |
End bp | 98417 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641667279 |
Product | hypothetical protein |
Protein accession | YP_001793516 |
Protein GI | 171184597 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0116921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTGGC TTGTTCCTCT TCTGCTGGCG GCTCTTGCCT TCGCCTACGT GGTCCCCTCG GAGGGTCTCG ACGTCTACTG GTGGGCCGCG CCCGACAAGG TGGCCGGCGT CGGCATAGAC GGGAGAACTC TGTGGCAGAT CGACGCGGTT TCCCCCCTGG CGGCGACGGA CCAGGTGGGG AGGTGTGTGG CGGTGGTCAA CAGGCCGTAT CTCTACGTGG TGAGGCAACA GCCTATGGAG CTTAGGGTTT CTATTCCGGC TACTGTCCAG CTTTCTCCTG ACCTCGTCAG CACTTTGAGC CAGTACGGCA TCTCCTTCCC AAGCACTGTC AACGTGGTGC TTAACTTCAC CATCCCCCTG CCGCCGCTTG TTTTGGCGAG CGTCTACAAG ACGTCGGTTG CCTCGCTTCA CACGCCCTAT GGCTACCCCC TGTGGGCCGT CTCGCTTGGG CCTAGGGTGA ACGCCACCGC CGTGGCCACA AACTGCCGGG ATGTGGCCGT GGGGACGATT TCGGGGGAGG TCTACGTGCT TAGGGATGGG AAGGTGTACG CCGTGTATAC ATACGGCGAG CCGGTGACCG CGCTTGCCTA CGGCCGGGAC GTCTTGTACG TCGGCACCGC CGGGGGCAAG ATCTACGCCG GGGGGAGCCT CGTCGGGTCG TGCTCCGGTT CTGTGTACTA CCTCGCAATG AGGCCGGACG GGAGCCCCGT GGCGCTCTGC TTCTCCAAGG GGGCGGTCCC CACTGTCGAG TACTACCCCT ACGGCGTTAG GCTGACCCCC TCCTCCTACG TGGACTACGG GATAGATACG CCGAAGGTGC CGGCGGCGCT GAGCCAAGAC GGCTCTCTCT TCGTCGCGGC TACCCAGGGC TACGTGGTGG CGTTTAGCGG GGGGCGCGAG CTGTGGAGGG CGAAGGCCCC CTCTCTGCCC ACTGCGGTGG CGGCCTCCAA CAACGGGTCT ATCGTCGTTG TGGGCACCCT AGGCGGCGAC GTCTTGGTGT ACTGGAACGG GAGGGAGGCG GCGAGGTTCC TCGGCTCGGC CCCCGTCACC TCCGTCGCCG TATCCGCCGA CGGGAGGGCC CTGGCGGTGG AGCGGTGGAA CACGGTCTCC GGCTTTAGGA TCGCCTTCGC CGCGGTGCGC GTCTCGGCGC CTCCCGAGTG CCTCCCCGCC GAGGTGCAGG TGGCGGTGGG CGGCTCGGTG TATAGGTACC TGGTGTCCGG CTCCGGCGTG GTGCTCCTTC CTGTGGGCGA CGTGACGGTG GCGCCCCAGT ACAAGTACCT AGGCGACTTC AGGTGCCGCC CCTTCGGCAA CGTGACGCTG GCGGTGAGGG GGGATCTGGA GAGCCCCATC GAGATAGGCT ACGTCAAGGA GTATAGGGTG CACCTCTCCC CTCCGAACAT AACGAGGGGC CCCGCCTGGG CCGCGGGGCC AGCCACCTTC TTCGCAGAGC CCAGCGTAAA CGTGCCGGTC TATAACTCGC CGGTTTCCTC CGGCCGCCTC GTCCTAGTTG GCTGGGAGGT AGATGGCAGG AGGATAGATC TGCCGACCCC CACCCTCTCC GTCAACGTGG AGGGGCCGAC GACGGTCAAG GCCATATACA GGGTTGAGCT GCCCCAGGCC GTGCCTATAG ACGAGCAGAG GCGCTACTGG CTGAAGACCG TGCTGGTCTT CGACGCCTTT GGGAACCCCG TGGCCTCCGG CGTAGCCCCC GAGGTGTCCA TCTACCCGGT GGTGGTGAGG GGGGTCTACG TCGAGCAGTA CAGGGTGCGC ACCTACTACC CCGCCACGGT CAACGGCTCC GACACGCTGT GGGCCGAGGC CGGGACTAAG GCGGTGTTTT ACGCCCCCGA CGTGGAGTTT AGAAACGGGA CGAGGCTGGC CTTCGTCAGG TGGAGGGAGG CCGAGTCGAG GGAGCGGACC CTTGCCGTCA CTGTCGAGGG CCCAACGACG CTTACGCCCA TATACGTCAC TCAGTACAGG GTGTGGGTGA AGCCGCCGGC TCAGGTGGTG GAGCCACCGA ACGCCACCTG GGCAGACCGC GGCTCTGTGA TAAGGGTGGC GGCGCCTCCC GTGTTGAACC AGAGCGGCGA CGTCAGAACT GTGGTTGGGC AGTGGCTGGT TAACGGCCTT CCCAACGCCA CGGGCGCCGT AGCGTCGTTT AGGGTGACGG CGCCGCTCAA CATAACCTAC GTAGCGAAGA GGCAGTACCT GGTAACCTTC GTCTCGGCCT ACGGCACGCC GCCCCCGCCC ATGTGGGTCG ACGAGGGGTC CACGGCGTCT GCGGTGCCTA CGCCGATGGA CGTCTGGTCG CCCCCGCCGC TGCACTGGAA GTTCGTCGGC TGGAGAGACA AGGCGACGGG CACCGTCTAC AGCTACCCCC AGATGCCCTA CGTCTACGGC CCCGCCACCT TCGAGGCCGT CTGGGCCCTA GACCCACTGC CTCTAGCCGC AATAGGCGGC GGGGCAGCCG CGGCGGCGTT CGCCGTGTGG TTCCTGAGGA GGCGGCGCCT GGCGAGGCTG ATGGCCGAGG TGGCGGAGTA G
|
Protein sequence | MRWLVPLLLA ALAFAYVVPS EGLDVYWWAA PDKVAGVGID GRTLWQIDAV SPLAATDQVG RCVAVVNRPY LYVVRQQPME LRVSIPATVQ LSPDLVSTLS QYGISFPSTV NVVLNFTIPL PPLVLASVYK TSVASLHTPY GYPLWAVSLG PRVNATAVAT NCRDVAVGTI SGEVYVLRDG KVYAVYTYGE PVTALAYGRD VLYVGTAGGK IYAGGSLVGS CSGSVYYLAM RPDGSPVALC FSKGAVPTVE YYPYGVRLTP SSYVDYGIDT PKVPAALSQD GSLFVAATQG YVVAFSGGRE LWRAKAPSLP TAVAASNNGS IVVVGTLGGD VLVYWNGREA ARFLGSAPVT SVAVSADGRA LAVERWNTVS GFRIAFAAVR VSAPPECLPA EVQVAVGGSV YRYLVSGSGV VLLPVGDVTV APQYKYLGDF RCRPFGNVTL AVRGDLESPI EIGYVKEYRV HLSPPNITRG PAWAAGPATF FAEPSVNVPV YNSPVSSGRL VLVGWEVDGR RIDLPTPTLS VNVEGPTTVK AIYRVELPQA VPIDEQRRYW LKTVLVFDAF GNPVASGVAP EVSIYPVVVR GVYVEQYRVR TYYPATVNGS DTLWAEAGTK AVFYAPDVEF RNGTRLAFVR WREAESRERT LAVTVEGPTT LTPIYVTQYR VWVKPPAQVV EPPNATWADR GSVIRVAAPP VLNQSGDVRT VVGQWLVNGL PNATGAVASF RVTAPLNITY VAKRQYLVTF VSAYGTPPPP MWVDEGSTAS AVPTPMDVWS PPPLHWKFVG WRDKATGTVY SYPQMPYVYG PATFEAVWAL DPLPLAAIGG GAAAAAFAVW FLRRRRLARL MAEVAE
|
| |