| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3348 |
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| Symbol | rplA |
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| ID | 7874246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3658453 |
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| End bp | 3659151 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643700282 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002890320 |
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| Protein GI | 237654006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.728506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAAGC TGTCCAAGCG AGTTCAGGCG CTGCGCGCCA AGGTCGACCG TAACCAGGCC
TATCCGGTTG CCGACGCCCT GCGTCTGGTC AAGGAGTGCG CCACTGCCAA GTTCGACGAG
TCGATCGACA TCGCGGTCAA CCTTGGTGTC GATGCGCGCA AGTCCGACCA GGTCGTACGC
GGTTCGGTCG TGCTGCCCGC GGGTACCGGC AAGTCGGTTC GCGTCGCCGT GTTCGCCCAG
GGCGACAAGG CCGAGGCCGC CCGCGCCGCC GGTGCCGAGG TCGTCGGCTT CGACGATCTC
GCCGAGCAGG TCAAGGCCGG CAATCTCGAT TTCGACGTCT GCATCGCGAC CCCTGACGCC
ATGCGCGTGG TCGGCCAGCT CGGCCAGATT CTCGGTCCGC GCGGCCTCAT GCCGAACCCC
AAGGTCGGCA CCGTGACCAT GGACGTCGCC ACCGCGGTGA AGAACGCCAA GGCCGGCCAG
GTGCAGTACC GCACCGACAA GGCGGGCCTG GTGCACGCCA CCATCGGCCG CGCCTCGTTC
GAGGTCGATG CGCTGCAGCA GAACTTGACC GCCTTCGTCG ATGCCCTCGT CAAGGCCAAG
CCGGCCGCGG CGAAGGGGAT CTACCTGCGC CGCATCGCCG TCTCCAGCAC CATGGGTGCC
GGCGTGCGCG TGGAGCCGGG CAGCCTCAAC CCTGCCTGA
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| Protein sequence | MAKLSKRVQA LRAKVDRNQA YPVADALRLV KECATAKFDE SIDIAVNLGV DARKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GDKAEAARAA GAEVVGFDDL AEQVKAGNLD FDVCIATPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTMDVA TAVKNAKAGQ VQYRTDKAGL VHATIGRASF
EVDALQQNLT AFVDALVKAK PAAAKGIYLR RIAVSSTMGA GVRVEPGSLN PA
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