Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3269 |
Symbol | |
ID | 7874490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3579720 |
End bp | 3581093 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643700203 |
Product | capsular polysaccharide biosynthesis protein CapK |
Protein accession | YP_002890241 |
Protein GI | 237653927 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGGCC TCTACACCCG CCTGGTCTCG GGCCTGCTTT TCCCGCTCCA CGAGCGCCTC AAGCAACACG ACAGCGTCGC CCTGCGGCGC GGCCTGGAGG ATAGCCAGTG GTGGCCGCGC GAGCGCATCG AGGCCCTGCA GCTCGAGCGC CTGCGTGCGC TGCTGGTGCA TGCGCGCGAC CACGTGCCCT ATTACCGCGA AGGCTTCGCG CGCATCGGCT TCGACCCCGC GGCGATCGCC AGCCTGGCCG AGCTGCAGAG CCTGCCCTTC CTGGGCAAGG CGGAGATCCG CGCCAATACC GAAGCCTTGA AGGCCGACGA CGCGGTCGGA CTGGCTCGCT TCAACACCGG CGGCTCGAGC GGCGAGCCGC TCATCTTCTT CATCGGCGAC CGGCGTGTGA GCCACGACGT CGCCGCCAAG TGGCGCGCGA CGCGCTGGTG GGGCGTCGAC ATCGGCGATC CCGAGATTGT CGTGTGGGGC TCGCCGATCG AGCTCGGCGC GCAGGACCGG GTGCGCGCAC TGCGGGATCG GCTGTTCCGT ACCGAGCTGC TGCCCGCCTT CGAGATGTCC GCCACGAAGC TGGACGGCTT CGTCGCCCGC ATCCGCGCGC GCCGCCCGAA GATGCTCTTC GGCTACCCTT CGGCGCTGTC CCATATCGGC CTGCACGCCG AAAGGCGCGG GATTCGCATG GACGACCTCG GCATCGAGGT GGCGTTCTGC ACCTCCGAGC GTCTCTACGA CCACCAGCGC GAGGCCATCG AGCGTGTCTT CGGCTGCCCG GTCGCCAACG GCTACGGCTC CCGCGACGCC GGCTTCATCG CCCACCAGTG CCCGCAAGGC GGCATGCACC TCACTGCCGA GGACCTCATT GTCGAGATCG TCGATGGCGA GGGCAGGGTG CTGCCGCCCG GGCAGGCGGG CGAGATCGTC GTCACCCATC TCGCCACCGG CGACTTTCCC TTCATCCGCT ATCGCACCGG GGACGTGGCG GTGATGGACA CCGCGACCTG CGCCTGCGGG CGCGGCCTGC CGATGCTGAG GGAGATCCAG GGACGCGCGA CCGACTTCGT CGTCGCCCGC GACGGCACCG TGATGCACGG GCTGGCGCTG ATCTACGTGC TGCGCGACCT GCCCCAGGTG GCGGGCTTCC GCATCGTGCA GGAGTCGCTG GAGCACACTC GGGTGCAGGT GGTGCCGGGC GTGGGGTTCG ACGCCGACAC TGTCGGTCGG ATCGAGCACG GTCTGGCGGC CCGGCTCGGC GAGGGGGTGC GGATCGACGT GGAGCAGGTT GCCGAGATTG CGCCGGAGAA GTCCGGAAAG TATCGCTACG TCGTCAGCAA GGTCGACGCC TCGGAGGTGT CATGCGCGAC CTGA
|
Protein sequence | MSGLYTRLVS GLLFPLHERL KQHDSVALRR GLEDSQWWPR ERIEALQLER LRALLVHARD HVPYYREGFA RIGFDPAAIA SLAELQSLPF LGKAEIRANT EALKADDAVG LARFNTGGSS GEPLIFFIGD RRVSHDVAAK WRATRWWGVD IGDPEIVVWG SPIELGAQDR VRALRDRLFR TELLPAFEMS ATKLDGFVAR IRARRPKMLF GYPSALSHIG LHAERRGIRM DDLGIEVAFC TSERLYDHQR EAIERVFGCP VANGYGSRDA GFIAHQCPQG GMHLTAEDLI VEIVDGEGRV LPPGQAGEIV VTHLATGDFP FIRYRTGDVA VMDTATCACG RGLPMLREIQ GRATDFVVAR DGTVMHGLAL IYVLRDLPQV AGFRIVQESL EHTRVQVVPG VGFDADTVGR IEHGLAARLG EGVRIDVEQV AEIAPEKSGK YRYVVSKVDA SEVSCAT
|
| |