| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2373 |
|---|
| Symbol | |
|---|
| ID | 7094295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011667 |
|---|
| Strand | + |
|---|
| Start bp | 35503 |
|---|
| End bp | 36504 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643701061 |
|---|
| Product | restriction endonuclease-like protein |
|---|
| Protein accession | YP_002364202 |
|---|
| Protein GI | 217980152 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3440] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0000067766 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTTG CTCAGTCAGA TCTCGCTACG CATATGACAA TAATCTGCCT AACACCTCAG
CCAGACTGGG ATGCTCCGAT CTTCAAGATT CTGGCGAACA ACGACACCGG GAGTGCTCCG
GGGCATCAGG GCGGGATTGT TATCCCGAAG GATCTGCGTT CTTTCTTTCC AGGGCTTGTG
GACAACACGT CGCACTACCG GCCAACGGTT GATCAACGTA TTGATGCCCA GCTTTTTGAC
GGAGACAAAT TTCTAGCGAC AGTGAACACT CGCTACCAGT ATCAGACATG GGGCGGCGCG
CGCAGTCCAG AGTCGCGTTT GACGGATCAG CTCTCTACTC TCAGAAATCG CGCAAGCGGT
GGCGACATCC TACTCATCCA GCGGAATATC AGCACTCTCG ATCAGTACCG CCTCGTACTA
GTACGTCAGT CGAGCCCTGA TTTTGCGCTG GTCATGCGCC TTGCGGCGGG GAGGCGCTGG
GGTGTGCTTT ACCCAGAACG AGTTCCCCTT GCAGACGATG ATCTAACAGA TGCGTTTAAG
GAAGAACTCG AGCGTGAGGG CAAGCCTTTC AAACTCATTG ACGACGAAGC TGGCACAACA
ACCGTAACTG TGAAGAAGGT TGCCCGGGCG CTTGCGTTTA GGACGATCGT TATTGCGCTT
TACGACGAAC GCTGCGCAGT TTGTGGAGAG GGGCTGAAGT CACCTGCTGG GGCTACTGAG
GTTGAAGCTG CTCATGTTGT CCCCCGCTCT CAGTTCGGTG CGGATGATGC CCGAAACGGT
GTTTCACTGT GTAAGGCACA TCACTGGGCG TTCGATAGAG GCCTGTTCGG CGTAGGGGAT
GATCGCACTG TCGTTGTTCC AAGCTCAGTA CGGTCACTTG TGCAGAACAA AAGCATCTCC
ACGTTTTTGG GTAGGCGAAT CAGGGAGGCC AGTGACCCTA GGCGCTCTGT TCATCCTGAT
GCTTTTGCGT GGCACCGCAA GAATCTGCTC CTCAGCGGCT AG
|
|---|
| Protein sequence | MVLAQSDLAT HMTIICLTPQ PDWDAPIFKI LANNDTGSAP GHQGGIVIPK DLRSFFPGLV
DNTSHYRPTV DQRIDAQLFD GDKFLATVNT RYQYQTWGGA RSPESRLTDQ LSTLRNRASG
GDILLIQRNI STLDQYRLVL VRQSSPDFAL VMRLAAGRRW GVLYPERVPL ADDDLTDAFK
EELEREGKPF KLIDDEAGTT TVTVKKVARA LAFRTIVIAL YDERCAVCGE GLKSPAGATE
VEAAHVVPRS QFGADDARNG VSLCKAHHWA FDRGLFGVGD DRTVVVPSSV RSLVQNKSIS
TFLGRRIREA SDPRRSVHPD AFAWHRKNLL LSG
|
|---|
| |