Gene Tmz1t_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2320 
Symbol 
ID7085307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2610433 
End bp2610972 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID643699341 
Productanti sigma-E protein, RseA 
Protein accessionYP_002355955 
Protein GI217970721 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACA AAGTGTCGGC GCTGTTCGAC GGAGATCTCG ACGACCAGGG CATGCGTGCG 
GTGTTCGACG GCATGCGCAA GGATGCTTCG CTGCGCAAGG AGTGGGACAC CTATTGCCTG
ATCGGCGACA CCCTGCGTGG CGACTCCGCC GGTTCAAGTG ATTTCGTTTC CCGTGTCATG
GTCAGCCTGG ATGACGAGCC GACGCTGCTC GCGCCTGGGG TCCCGGCGGC AGGCCTCGCG
CAGCGCGGCC TCGTGCATCG CCTGATGCCG CTGGCCGCTT CGGTGATGGG GGTGGCCGCG
GTGGGGTTGG TGGCCGCGAG TCTGTACCGG CAGGACGCGC CGGCGCCGCA GATGGCGGTC
GCCGCGTCGC CGATCCAGTT CGTCGGTTCC TCGAATGTGC GCCCGGTCGC CGCTCCGGCG
GCCGATCCGA TGCGCGAGTA TCTCTTCGCC CATCAGGGCC TCAGCCGCGG CGGCCCGATG
CCGGCCGGCG TGCAGTACGT CCGCACCGTA TCCGACACGC GCGAGGGCGG CGCTCGATGA
 
Protein sequence
MKDKVSALFD GDLDDQGMRA VFDGMRKDAS LRKEWDTYCL IGDTLRGDSA GSSDFVSRVM 
VSLDDEPTLL APGVPAAGLA QRGLVHRLMP LAASVMGVAA VGLVAASLYR QDAPAPQMAV
AASPIQFVGS SNVRPVAAPA ADPMREYLFA HQGLSRGGPM PAGVQYVRTV SDTREGGAR