| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1131 |
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| Symbol | |
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| ID | 7084660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1240265 |
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| End bp | 1242280 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698146 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002354786 |
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| Protein GI | 217969552 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00726608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATT CATTGTTGGG GTTGCCGCGG CCTTACAAGC GTGCGCTGCA GGTGGTGGCG
GACGTGGTGC TGGTGTGGGT GGCGCTGTGG CTGGCGTTTT ACCTGCGCCT GGAGGACGTG
CGCGCGATCG AGCCCTTCGG CGGCCATCTG CGCGTGTTCC TGCTGGCGCC GGTGCTGACG
CTGCCCTTCT TCGTGGTGCT GGGCCTGTAT CGGGCGGTGC TGCGCTATGT GGGGCGGCAC
GCGCTGATCA CGATCGGCAA GGCGGTGACG CTGGCGGCGC TGGTGTTCTG GCTGGTGGTG
CTGGCGCTGC CGGTGCAGCA GCCGCCGGTG CCGCGCTCGG TGCCGCTGAT CTATTGGGCG
ACGGCGATGC TGCTGCTGGG CGGGCTGCGC CTGGTGATGC GCAATGTCTT CCTGGGCGAG
TGGACGCCGC TGCCGCCGGC GGTGCGCGGG GTGCGCGGGG TGCCGCATCG TGTCGAGGGT
GCGCAGGAGC GCCCGCGCGT GGTGGTGTAC GGCGCGGGCA GCGCGGGCAA CCAGCTGGTG
AGCGCGCTGC GCGCCGGGCG CGAGCTGCGG CCGATGGCCT TCGTGGATGA CGATGCGTCG
CTGTGGGGCA CGGTGGTCGA TGGTCTGCCG GTGTATGCGC CCGAGGACAT GGGCCGCATG
CTGGCGGAGA CGGGGGCGAC GCAGGTGCTG CTGGCGGTGC CGTCGGCGTC GCGCCAGCGC
CGGCGCGAGA TCCTCGATCT GCTCGATCCG TATCCGGTGC ATGTGCGCAC GCTGCCGGGT
TTCAAGAGCC TGGTCGATGG CAAGGTGAAG GTGCAGGACC TGCAGGAGGT GGACATCGCC
GACCTGCTGG GGCGCGAGCC GGTGGAGCCG GACGAGGCGC TGTTCGAGCG CTGCATCCTG
GACCAGGTGG TGATGGTGAC GGGGGCGGGC GGCTCGATCG GTTCGGAGCT GTGCCGCCAG
ATCGTGACCT GCCGGCCGCG CGGGCTGGTG CTGTTCGAGC ATTCGGAATA CGCGCTGTAT
TCGATCCACA CCGAGCTCGA GCGCTACATC AAGGAGCGCG GGCTGGTGAT CGAGCTGGTG
GGGATGCTGG GCTCGGTGCG CAACGGCGGG CGCATGTTCG ATGCGCTGAC GGCGTGGAAG
GTGGATACGG TGTATCACGC GGCGGCGTAC AAGCATGTGC CGATCGTGGA GCACAACATC
GCGCAGGGCT TCTTCAACAA CACCATGGGC ACGCTGCACG CGGCGCAGGC GGCGTTGCGC
GCGGGGGTGC GCAACTTCGT GCTGATCTCG ACCGACAAGG CGGTGCGCCC GACCAATGTG
ATGGGGGCGA CCAAGCGCCT GGCCGAGCTG GTGCTGCAGG GGCTGTCGGT GGAGCCGGCG
CCGGTGCTGT TCCGCGAGGA TGTGGAGGGG GCGGTGCCGA ACCGCACGCG CTTTACCATG
GTGCGTTTCG GCAATGTGCT GGGCTCGTCG GGTTCGGTGA TTCCGCTGTT CCGCGAGCAG
ATCCGCCGCG GTGGGCCGAT CACGGTGACC GACCCGCGCA TCACGCGCTA TTTCATGACC
ATCCCCGAGG CGGCGCAACT GGTGATCCAG GCGGGTTCGA TGGGCGAGGG CGGAGACGTG
TTCGTGCTCG ACATGGGCCA GCCGGTGAAG ATCGTGGATC TGGCCGAGCG CATCGTGCAT
CTGTCTGGCC TGTCGGTGAA GTCGAAGTCG CACCCGCAGG GCGACATCGA GATCGTCTTC
ACCGGCCTGC GCCCGGGCGA GAAGCTGTAC GAGGAGCTGC TGATCGGCGA CAACGTGCTG
CCCACCGCGC ATTCGATGAT CATGCGCGCC AACGAGGAGC GCCTGTCCTG GCGCCAGCTC
ACCCTCGGTC TGGACGCCAT CATCCAGGCC ATCAAGAACG GCGACTACCC CGCGGTGCGC
GAGGTGCTGA AGCTGCTGGT GAGCGGCTAC GAGCCCGACG AGCGCCTGGT GGATTTCATC
TACCTGAAGC GCAATCAGGA GGAAGACCGC CCGTAG
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| Protein sequence | MRNSLLGLPR PYKRALQVVA DVVLVWVALW LAFYLRLEDV RAIEPFGGHL RVFLLAPVLT
LPFFVVLGLY RAVLRYVGRH ALITIGKAVT LAALVFWLVV LALPVQQPPV PRSVPLIYWA
TAMLLLGGLR LVMRNVFLGE WTPLPPAVRG VRGVPHRVEG AQERPRVVVY GAGSAGNQLV
SALRAGRELR PMAFVDDDAS LWGTVVDGLP VYAPEDMGRM LAETGATQVL LAVPSASRQR
RREILDLLDP YPVHVRTLPG FKSLVDGKVK VQDLQEVDIA DLLGREPVEP DEALFERCIL
DQVVMVTGAG GSIGSELCRQ IVTCRPRGLV LFEHSEYALY SIHTELERYI KERGLVIELV
GMLGSVRNGG RMFDALTAWK VDTVYHAAAY KHVPIVEHNI AQGFFNNTMG TLHAAQAALR
AGVRNFVLIS TDKAVRPTNV MGATKRLAEL VLQGLSVEPA PVLFREDVEG AVPNRTRFTM
VRFGNVLGSS GSVIPLFREQ IRRGGPITVT DPRITRYFMT IPEAAQLVIQ AGSMGEGGDV
FVLDMGQPVK IVDLAERIVH LSGLSVKSKS HPQGDIEIVF TGLRPGEKLY EELLIGDNVL
PTAHSMIMRA NEERLSWRQL TLGLDAIIQA IKNGDYPAVR EVLKLLVSGY EPDERLVDFI
YLKRNQEEDR P
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