Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0779 |
Symbol | |
ID | 7084171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 864402 |
End bp | 865073 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643697803 |
Product | Radical SAM domain protein |
Protein accession | YP_002354444 |
Protein GI | 217969210 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.141038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTG TCGAAACGGC GCCGGCGACG GCCGTGCGCC TCCGTATCAC CGAGATCTTC GCCTCGCTGC AGGGCGAATC CACCCGCGTC GGCCTGCCCA CCGTGTTCGT GCGCCTGACC GGCTGCCCGC TGCGCTGCAC CTGGTGCGAC ACTGCCTACG CCTTCAGCGG CGGCGAGACA CGCACGCTCG ACGACATCCT CGCCGAGGTG GCCAGCCACG GTCTGCGCCA CGTGTGCGTG ACCGGCGGCG AGCCGCTCGC ACAGAAGGGC TGCCTACCGC TGCTCGCCGC GCTGTGCGAT GCCGGCCACG ACGTGTCGCT GGAAACGAGC GGCGCACTCG ACATCGCGGG GGTCGATCCT CGCGTGTCGC GCATCGTGGA CCTCAAGGCC CCGGGCTCGG GCGAGCTCGC CCGCAACCGC TGGGAAAACC TCGCGCTGCT GTGCGCTCAC GACGAGCTCA AGTTCGTGCT CGCCGACGCC GCCGACTACG CATGGGCCAG GCAGCAGATC GCCGAGCACC GCCTCGCCGA ACGCTGCGGC GTGCTGCTGT CGCCGGTCGC CGGCGCGCTG GACCCTGCCG AGCTCGCCGG ATGGATCGTG CGCGACCGCC TGCCGGTGCG CTTCCAGCTC CAGCTCCACA AGATCCTGTG GAACGACGCC CGCGGCCGCT GA
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Protein sequence | MSAVETAPAT AVRLRITEIF ASLQGESTRV GLPTVFVRLT GCPLRCTWCD TAYAFSGGET RTLDDILAEV ASHGLRHVCV TGGEPLAQKG CLPLLAALCD AGHDVSLETS GALDIAGVDP RVSRIVDLKA PGSGELARNR WENLALLCAH DELKFVLADA ADYAWARQQI AEHRLAERCG VLLSPVAGAL DPAELAGWIV RDRLPVRFQL QLHKILWNDA RGR
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