Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0196 |
Symbol | |
ID | 7084317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 229931 |
End bp | 230890 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643697238 |
Product | transcriptional regulator, PaaX family |
Protein accession | YP_002353887 |
Protein GI | 217968653 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCC GCGTGATCGA ACGCTGGGTC GAGGCCCACC TCGCCGGACG GCGCATCAGC GCCAACTCGC TGATCATCTC GGTGTATGGC GACCTGATCG CGGTGCACGG CGGCGTGGTG TGGCTGGCCG ACCTGATCCG GCTGATGGCG CCCTTCGGGC TCAACGAGCG CGTGGTGCGC ACCAGCGTCT ATCGGCTGGT GCAGGACGAC TGGCTGGAGT CGGGACAGGT CGGCCGGCGC AGCTACTACC GCCTCGCCGC ATCCGGCATG CGCCGTTTCG CGCCGGCGTG GCGGCGGATC TTCGAGCCCG AGGGGGAGGG CTGGAGCGGG ACCTGGCAGG TGGTGATGCT GCCCTCCGCG CTCGAGGCGC GGGTGGCGGA CAACCTGCGC CGGGAGCTGT CTTGGGCGGG CTACGGGGCG CTCAACGCCG GCGTGCTGTT GCGCCCGACC GACGACGCCT CGACCCTGCG CAACATCCTC GACGGCTGCG GCCTGCGCGA CCGCGTGGTG CCGCTCACCG CGCGCGGCCT GGACGGGGTG ACCGGCGCGG CCACCGACGA GCTGGTGCGC GAGTGCTGGG ACCTGCAGGC GATCGCCGCC ACCTACGACG GCTTCATCGA GCACTTCCGG CCGCTGCTGC GCGCCTTCGG TGCGGGCGAG GCCGAGCCGG AGCAGGCCTT CCTGGTGCAG ACCCTGTTGA TGCACGAGTT CCGCCGCGTG CTGCTGCACG ATCCGCAGCT GCCGGTGCAG GTCATGCCCA ACCGCTGGCG GGGGGACGCG GCGCGCGAGC TGTGCGCGCG ACTGTATCGG CTGAGCTGGC GAGCGGCGTG CCGGCACCTG CAGGCGAGTT GCGCCACGCC CGAGGGGCCG CTGCCGCCGC CGTCGGCGCA GTTCTTCCGC CGCTTCGGCG GTCTGGAGCT GCCGCCGGCG GCGACGGACG AGGTCGCGGC CGAGGGCTGA
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Protein sequence | MKSRVIERWV EAHLAGRRIS ANSLIISVYG DLIAVHGGVV WLADLIRLMA PFGLNERVVR TSVYRLVQDD WLESGQVGRR SYYRLAASGM RRFAPAWRRI FEPEGEGWSG TWQVVMLPSA LEARVADNLR RELSWAGYGA LNAGVLLRPT DDASTLRNIL DGCGLRDRVV PLTARGLDGV TGAATDELVR ECWDLQAIAA TYDGFIEHFR PLLRAFGAGE AEPEQAFLVQ TLLMHEFRRV LLHDPQLPVQ VMPNRWRGDA ARELCARLYR LSWRAACRHL QASCATPEGP LPPPSAQFFR RFGGLELPPA ATDEVAAEG
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