| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1920 |
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| Symbol | |
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| ID | 5297504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1905092 |
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| End bp | 1907374 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770186 |
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| Product | MutS2 family protein |
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| Protein accession | YP_001307137 |
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| Protein GI | 150021783 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.380002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGGT TTATTGATTG GAAAGAGGTT TTTAAAGAGT TTTTGAAATA TACATTTTCT
GTTTATGGAA AAGAACACCT TGAAAAGCTT GTTAAAGAAA AACCATCTTC GGAAGAATAT
GATTATCTTC AAGAGGTTAT AGGAATACAG GTAACCCAGG GGTTACCTGT ATTTCCTAAA
GTAGAAGATA TTAGACCACT TTTTGAAAAA TTAAGAAGTA GTTACGTTCT TGAAGCTAAT
GAAATATTTA AGATAAAAGA ATTTATGATA CTTGTTAGAG ATTTAAAAAA GGCAATAACG
AGTACAAGAT ATAAAGTTAG TTTTTATATT TCAAAACTTA GTGATTATAA TTCACTTATT
GATGAAATTG ATGCCATATT TGAACCTGAC GGGAGCATAA AAGATAGTGC TTCAAAGAAT
TTGTCAATTA TTAGAAAAGG ACAAAGAAAG TTATATGGTG AGATTAAATC TAGAATTGAA
AAATTTGTTT CTAAGAATGG TAAATATTTG CAAGAGCAAT TGTATACAAT TAGAAATGGT
AGGTATGTTT TTTTGATTAA ATCTGGTGCA AGAGGTCATT TGAATGGTAT CGTACATGGT
GTTTCTAATA CGGGAGTTAC ATTGTTTTTT GAACCACAAG AATTTATACA TCTTAACGAT
AAAATAGAGA TGTTACAAGA TGAAGAGCGA ATGGAAATTA ATAAAATACT GAGAGGAATT
AGTAGTAAAA TCCACGATAG ATATGCGTAC TTAATAAAGG ATATACAGAT AGTTGGACAT
ATTGATTCTT TATTTGCGAG GGCAAAATAT GCGTATAAGA GAAAAGGAAT AATTGTAAAG
CCAGAAGGTG ATTATTTAAA GTTAGTAAAT GCTCGACATC CATTAATTTC AGATGAAAAA
GTTGTTCCAG TATCAATTGA TATTCCAAAA GATAAAAAAG GGTTAATAAT AACAGGACCA
AATACTGGTG GAAAAACGGT AACTTTAAAA ACAATTTCAC TTTTTATATT TATGTCCCAA
CATGGATTTC CAATTCTTGC GGATATTGGA ACGCGTATAC CAGAATTTAA ATTATTTGTA
GATATTGGTG ATACTCAAAA TGTAGTTGAA AATTTAAGTA CATTTTCTTC TCACATGGTG
AGGATTATAG AAGCATTGAA TAATGCAGAT AGTGATTCTC TTGTTATAAT AGATGAATTA
GGGTCTGGTA CCGACCCATT TGAAGGTAGT TCTCTTGCAA TTGCTATTAT TGAGTACTTG
TTAGAAAAGA GAATAAAATT TGTGATTACT ACCCATCTTA CAAATGTTAA GTTGTTTGCA
ATGGAACGGG ATGATATAAT TACGGCATCT ATGGAATTTG ATTTAGAAAC GTTATCACCT
ACATACAGGC TTCTTTTGAA CACACCAGGT GCATCACATG CTTTTGAAAT TTCTGAAAAG
TTAGGTTTGG ACAAAAAGAT AATAGAAAGG GCAAAAGAAT ACATTTCTAA AGATAAAATG
AAGGTGGAGA ATATAATAAG AAATCTTAAT ATGAAAGTTA GTGAACTTGA GGAGAAAAAG
AGAGCTTTAG AAGAAACGCT AAGAGAATAT GAGAAACTAA AGCAAGAATA TGAACGAAAA
TACAATATAT TAAAGGTAAA AAAAATAGAG GAATTAGATA AAGAATTAAG AGATTTGTAT
AAAGAATTTA GAGATGCAAA GAGGGAATTG CAAACAGCCC TGTTTTCAGC TAGAACGAAG
AAAGAAGAGT TGATAAAAAA AAGGTTAAAA AACATAGAGG CAAAAGAGAG AGAGATGAAA
GGCGTCAATG AAAAATTAGA AGTAATGAAA TATCCAATCT TGAATGAAGA AATTAATATT
GGAGATTATG TAAAATTAAT AGATGGAAAT ACAATTGGAA AGGTTGTTGA AGAAAGGCAA
TCTGGGAAAT TTTTAGTGGA TTTTAATGGG TTGAAGATTG AGGTAAAGAA GAATAAATTA
AAAAAATCTG AGCAACCAAA AGAGAACAAG GAAGTTGTTT ATATTTCAAA TAGTTTGAAA
TTACAATCTA ATGAGATTGA CCTTAGAGGA AAAACTGTTG AAGAGGCAAT TGAAATAGTT
GACAAGTTTA TAGATGATCT AATATATTCG GATTTTTCAA CAGGATATAT TATTCATGGA
AAAGGTACGG GGAGTTTGGC TTCGAATATA TGGAATTATT TGAGAAAAGA TAAAAGAATT
AAAAGTTATA GATTTGGAAG GCCAAGTGAA GGTGGTGTAG GTGTTACAGT CGTGGAGGTG
TAA
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| Protein sequence | MERFIDWKEV FKEFLKYTFS VYGKEHLEKL VKEKPSSEEY DYLQEVIGIQ VTQGLPVFPK
VEDIRPLFEK LRSSYVLEAN EIFKIKEFMI LVRDLKKAIT STRYKVSFYI SKLSDYNSLI
DEIDAIFEPD GSIKDSASKN LSIIRKGQRK LYGEIKSRIE KFVSKNGKYL QEQLYTIRNG
RYVFLIKSGA RGHLNGIVHG VSNTGVTLFF EPQEFIHLND KIEMLQDEER MEINKILRGI
SSKIHDRYAY LIKDIQIVGH IDSLFARAKY AYKRKGIIVK PEGDYLKLVN ARHPLISDEK
VVPVSIDIPK DKKGLIITGP NTGGKTVTLK TISLFIFMSQ HGFPILADIG TRIPEFKLFV
DIGDTQNVVE NLSTFSSHMV RIIEALNNAD SDSLVIIDEL GSGTDPFEGS SLAIAIIEYL
LEKRIKFVIT THLTNVKLFA MERDDIITAS MEFDLETLSP TYRLLLNTPG ASHAFEISEK
LGLDKKIIER AKEYISKDKM KVENIIRNLN MKVSELEEKK RALEETLREY EKLKQEYERK
YNILKVKKIE ELDKELRDLY KEFRDAKREL QTALFSARTK KEELIKKRLK NIEAKEREMK
GVNEKLEVMK YPILNEEINI GDYVKLIDGN TIGKVVEERQ SGKFLVDFNG LKIEVKKNKL
KKSEQPKENK EVVYISNSLK LQSNEIDLRG KTVEEAIEIV DKFIDDLIYS DFSTGYIIHG
KGTGSLASNI WNYLRKDKRI KSYRFGRPSE GGVGVTVVEV
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