| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1917 |
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| Symbol | |
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| ID | 5297361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1899984 |
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| End bp | 1902656 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770183 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001307134 |
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| Protein GI | 150021780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.100077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGAAC TATTTCTTTT TGATGGTACG GGATTGGTAT ATAGAGCATT TTATGCAATA
GATCAATTCT TAAAAACTTC TACTGGAATG CATACAAATG CATTGTATGG AATTGCAAAG
ATGTTAATAA AGTTTTTAAA AGAGCATGTT AATATGGAAA AAGATGCTTG TGCTTTTATT
TTGGATTCCA AAGGTGGAAG TAAAAAAAGA AAGGAGATTT TAAAAGATTA TAAATCAAAT
AGACCAGAAA CACCAGATCT TATATTAGAG CAACTGCCAT ACATTGAAGA ATTTGTTGAT
GCATTTGGTG TGAAGGTTTT AAAGTTATTG GGATATGAGG CAGATGATAT AATTGCAACT
ATTGCAAAAA GGTTCTGCAA TGCCTTTGAG AAGGTGAATA TAATCACTGG TGATAAAGAC
TTATTGCAAC TTGTTGATGA AAAGGTTTAT GTTTGGCGAA TAGAAAGGGG TATTACTGAG
TTAGTATTGT ACGATAGAAA AAAGGTTTTT GAAAAATATG GAGTTTTTCC CGAGCAATTT
GGTGATTATC TTTCACTTGT GGGTGATCAA ATCGATAACA TTCCTGGAGT TAAAGGTATT
GGGAAAAAGA CAGCTGTTTC GCTACTTAAA AAGTACGGAA CAATTGATGA GGTTTTGAAA
AATAAAAAAT TACTTACAGA AAAGTTGCAA AAATTATTAG AAAATGCAAC CGAGAGCTTA
GAAAAAAGTA GACAATTAGT TCAACTTATA TACGATGTTC CTTTAGACGT AAACATCGAA
GATTTAATAT ACAAAGGTTA TGATTCAAAA AAGCTTTTAG TTGTGTTGAA AAAATATGAA
TTTTCTTCTA TTATAAAAGA ATTAGGTTTA AAAGAAGAGT TTGAAAAAAA GTATACAATA
GTCAATTCTG AGAAGGAATT ATCTAAGTTG AGAAAAAGAA TTGATGAAGT TAAAACTTTT
TCCATAGATA CGGAAACAAC CTCACTTGAT CCATTTAGTG CAAAACTTGT AGGTGTTTCT
ATTTCTACTA ATGAGGGTGA AGCGTATTAT ATTCCCATTT CACATGTAAG TGAGAATAAT
TTAACTAAAG AAATAGTTTT AAAATTTTTA AAGGAAATTT TGGAATGTGA AAGATATAAT
ATAGTTGGAC AGAATTTAAA ATTTGATTAT AAGGTATTTA TGGTAAATGG AATTGAACCA
CAAATTCCAC ACTTTGATAC AATGGTTGCA GCATATCTTA TCAATCCGGA AGAGAGAAGG
TACAACCTTG AAGAGTTAGC TTTAAAGTAT CTGGGGTATA AAATGATAAG TTTTGAGGAG
TTAGTAGACA ACAATATGCC ATTGTTTGGT AACGATTTTT CTTTTATCTC AATAGAAAAA
GCTGCGGAGT ATTCTTGTGA GGATGTAGAT ATTACATTCA GACTTTATAG CTATTTGAGT
AAGTACATAG GTGAAATGAA AGAACTCTTT TACAATATAG AGATGCCATT AATAAATGTT
TTGGCTCAGA TGGAGTTGAA CGGGGTTTAT TTTGATGTTG ATTATTTAAA AGAGTTATCT
AAAAGATATG AAGAAGAAAT GAAAAAGTTG GAAGAAAAAA TATTTGAAAT TTCTGGTGAA
CAGTTTAATA TAAATTCTTC AAAACAAGTT GCGGAAATAC TTTTTGAGAA ATTGAAACTT
CCTATAGTTA AAAAAACAGC AACTGGTAGA AATTCAACAA ATGCGGAAGT TTTAGAGGAA
CTTGCTAAAG ATTATGAAAT CGCGCGATTA ATCCTGGAAT ACAGAAAATT TCAAAAGTTA
AAAAGTACGT ACGTAGATTC TATACCTAGT AGTGTTAATA TCACAACAAA TAGAGTACAT
TCTAGTTTTC ATCAAACAGG TACTTCGACT GGGAGGTTGA GTAGTTCAGC TCCAAATCTT
CAAAATTTGC CTACTAGGAG TGAAGAAGGG AAAGAAATTA GACATGCTGT TAAACCTCAA
TTTGAAAATT GGTATATTGT TGGAGCAGAT TATTCTCAAA TAGAATTGAG AGTGTTAGCA
CATATGAGCG AGGATGAAAA ATTGTTAGAT GCATTTGAAA ATGATTATGA TATACATACA
ATTACTGCTT CGAAGATATT TAATGTATCT GAATTAATGG TTACTGAAGA TATGAGAAGA
ATAGGTAAAA TGATTAATTT TGCAATAATT TATGGTATTT CGCCATATGG TCTTTCAAGA
CGAATAGGAT TAAATGTGAA TGAAACAAAA AAGATAATAG ATAATTATTT TAAATATTAT
CAAGGTGTAT TTGAATTTAT TAAGAAAACA ATAGATTTTG CTAAAAAAAA TGGTTTTGTA
AAAACCTTGT TTGGAAGGAA GAGGTTTATT CCACAGCTTA AGTTAAAAAA TAAAAATTTA
ATTCAAGAGG GAGAGAGAAT TGCTATAAAC ACTCCTGTAC AAGGAACTGC CGCTGACATT
ATTAAAATTG CAATGGTAAA GGTTCATAAT GAGTTAAAAA GGAATAGTTT GAAAACAAAA
CTGATTTTAC AAGTTCATGA TGAACTGGTA TTTGAGGTAC CTTTTGACGA ATTACAGATT
GTAAAGGAGA TAATAAAAGA TAAAATGGAG AATGCTGTTA AGCTAAAAGT TCCATTAAAA
GTGGATTTAT ATGAAGGAAG AGAGTGGGAG TGA
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| Protein sequence | MRELFLFDGT GLVYRAFYAI DQFLKTSTGM HTNALYGIAK MLIKFLKEHV NMEKDACAFI
LDSKGGSKKR KEILKDYKSN RPETPDLILE QLPYIEEFVD AFGVKVLKLL GYEADDIIAT
IAKRFCNAFE KVNIITGDKD LLQLVDEKVY VWRIERGITE LVLYDRKKVF EKYGVFPEQF
GDYLSLVGDQ IDNIPGVKGI GKKTAVSLLK KYGTIDEVLK NKKLLTEKLQ KLLENATESL
EKSRQLVQLI YDVPLDVNIE DLIYKGYDSK KLLVVLKKYE FSSIIKELGL KEEFEKKYTI
VNSEKELSKL RKRIDEVKTF SIDTETTSLD PFSAKLVGVS ISTNEGEAYY IPISHVSENN
LTKEIVLKFL KEILECERYN IVGQNLKFDY KVFMVNGIEP QIPHFDTMVA AYLINPEERR
YNLEELALKY LGYKMISFEE LVDNNMPLFG NDFSFISIEK AAEYSCEDVD ITFRLYSYLS
KYIGEMKELF YNIEMPLINV LAQMELNGVY FDVDYLKELS KRYEEEMKKL EEKIFEISGE
QFNINSSKQV AEILFEKLKL PIVKKTATGR NSTNAEVLEE LAKDYEIARL ILEYRKFQKL
KSTYVDSIPS SVNITTNRVH SSFHQTGTST GRLSSSAPNL QNLPTRSEEG KEIRHAVKPQ
FENWYIVGAD YSQIELRVLA HMSEDEKLLD AFENDYDIHT ITASKIFNVS ELMVTEDMRR
IGKMINFAII YGISPYGLSR RIGLNVNETK KIIDNYFKYY QGVFEFIKKT IDFAKKNGFV
KTLFGRKRFI PQLKLKNKNL IQEGERIAIN TPVQGTAADI IKIAMVKVHN ELKRNSLKTK
LILQVHDELV FEVPFDELQI VKEIIKDKME NAVKLKVPLK VDLYEGREWE
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