Gene Tmel_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1810 
Symbol 
ID5296499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1794016 
End bp1794792 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content30% 
IMG OID640770078 
Producthypothetical protein 
Protein accessionYP_001307030 
Protein GI150021676 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.27358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT CTGAAAAGTT ATACAAAAAA GCACTTGAAT ATATTGATAA TGAAATTTAT 
TTAGAAGATT ATATTATTGG GTATGGTTTA ACTTCAGCAG TTTTAAGTGA TAATAGTTGT
GGAGTAAGTT ATACACTTAG AGAAGATACT TTGGGAAAAT GTGAGGAGTT TTTTAAATGT
ACTTCAAGTT CAGGAAATCC AACAAGTAAA ATTAATGTGG GTATGAAAGT TAATGAAATT
TTGAAAATTG GCTTATTTTC TTCTGATCCT TTTACACGTT CAGTTGGATA TGCAACACTT
AATGCTATTT TACAGAACAA TATGAAAAAT TATGAAAAAG GAGATATAAT AGAATTTTTG
GAGGTTTCTT TTGAAGATAT TGTTGGGATT GTTGGGAAAA TAGATCCTTT AATAGAGTAT
TTAAAACCAA TTGTATGGGA TGTTTTGGTT TTTGATAGAA ATAGAAATGG GAGTGAAGAA
ATATTACCTG ATTGGTCTAT AATTGAGCTT TTACCCAAAT GCTCTGTGGT AATAATAACT
GGAGCAGCTG TTATTAATGG AACTATTGAT TGGATTTTGA AGTACGTAAA TACAGATAGA
ATAGCAATTG TTGGGCCTTC AACTCCACTT GTAAAAGATA TTTTCCCAGT TAAAATACTT
GCAGGGGTGA AAATTTTGGA TTCAAAAAAG CTATTTAAGT TAATAGCTCA TGGTGCAGGT
ACTAAGAAAA TAGTTGCAGA AAAAGTTGTT GAAAAGATTG TTCTAAAGGA GGGATAA
 
Protein sequence
MRISEKLYKK ALEYIDNEIY LEDYIIGYGL TSAVLSDNSC GVSYTLREDT LGKCEEFFKC 
TSSSGNPTSK INVGMKVNEI LKIGLFSSDP FTRSVGYATL NAILQNNMKN YEKGDIIEFL
EVSFEDIVGI VGKIDPLIEY LKPIVWDVLV FDRNRNGSEE ILPDWSIIEL LPKCSVVIIT
GAAVINGTID WILKYVNTDR IAIVGPSTPL VKDIFPVKIL AGVKILDSKK LFKLIAHGAG
TKKIVAEKVV EKIVLKEG