Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1777 |
Symbol | |
ID | 5297345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1766385 |
End bp | 1767902 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640770045 |
Product | histidine ammonia-lyase |
Protein accession | YP_001306997 |
Protein GI | 150021643 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATA ATCAAATTTT TAAGGGGGGA GTAGTTTTGG TAAAGATAGA TGGAAACACT TTAACAATCG ATGATGTTCA TAATGTTGCA AGAAATAAAG AAGATGTAAC TCTTGATCCA GAAGCAAAAT TAAGGATTGA AAAATCAAGA GAAAACATTG AAAAAATTTT AAAAGATGAA AAACCAGTTT ATGGTGTAAA TACTGGATTT GGTGCGTTGG TAAATGTAAG AATTTCAAAA GAAGAGTTAG CTGCTCTTCA GAGGAACATA GTATTATCTC ATGCAGCAGG AATTGGTAAG TCACTAGAAC CTGATGTTAT AAGGGCTATG ATGCTTTTGA GGGCTAATTC TTTAGCAAAG GGTTTTTCAG GTGTTAGACC GTTGGTTATT GAAAAATTAA TTGAATTTTT GAATAAAGAT GTTGTACCAT TTGTGCCAGA AATGGGTAGT GTTGGTGCAA GCGGGGATTT GGCACCACTT TCACATATTG CTATGGCATT AATTGGTGAA GGTTATATAA TGTCTGGAAA TAAAAAGATT AAAACTAAGC AGTTTTTAGA TTCAAAAGGT ATTAAACCTT TGGTATTAAG AGAAAAAGAA GGATTGAGTT TACTAAATGG AACACAATTT ATGACATCGA TTTTGTCACT GTTAGTAAGA GATATGTTCA AATTAATTGA AGTTGCAACT TTAGTGGCAG CTGGAGCTGT TGATGTGTTG CTTGGAACTC CAAAAGCTTA TGATGAAAGA ATACAATTAG CAAGAAATCA CAAAGGACAA ATTTACATTG CAAAGTTGTT GAGAGATTAT TTATCAAATA GTGAATTAAG AGAGTCTCAT ATTGATTGTG GAAATGTACA GGATGCATAC ACCCTTAGAA CAATTCCACA AGTTTATGGT GCAGTATATG ATATCCTTGA ATTTGCAAAA AGCGTAGTTG AAAATGAAAT AAATGCTGCA ACAGATAATC CTTTAATCTT TGATGGAGAA GTAATAAGTG GCGGAAATTT TCATGGTGAA CCTGTTGCTC TTGTTTGTGA TTATCTTTCA ATTGCCTTGA CAGATATGGG AAATATGATT GAAAGACGAA TTGATAGATT GGTAAATCCT ATGGTTAATA GAGGTCTTGC ACCGTTTCTT GCAACTGGTA AAGAAGGATT GAATTCTGGA TACATGATTT GGCAATATAC AGCGGCAGCA ATTTGTAATG AAAATAAGGT TTTATCTCAT CCTGCAACTT CTGATACTAT TCCAACATCA GCATATCAGG AGGATCATGT AAGTATGGGT GCAACAGCTG CAAGAAAATT AAAAAAAATC TATTCAAACC TTATTAATTT AATATCAATA GAGGCAATGT TGGTTAAAGT TGCATTGGAA TTAAGAAGAC CTCTAAAGTC ATCGGAAAAA GTTGAAAAAT TTTTTGAGAA GATAGAGATC CAAATGAATG GAGATAGATA CTTTGGAGAT GATTTTAATA ATGTTAAAGA AAAAATTATC TTGGAGGTGG AGAGATGA
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Protein sequence | MINNQIFKGG VVLVKIDGNT LTIDDVHNVA RNKEDVTLDP EAKLRIEKSR ENIEKILKDE KPVYGVNTGF GALVNVRISK EELAALQRNI VLSHAAGIGK SLEPDVIRAM MLLRANSLAK GFSGVRPLVI EKLIEFLNKD VVPFVPEMGS VGASGDLAPL SHIAMALIGE GYIMSGNKKI KTKQFLDSKG IKPLVLREKE GLSLLNGTQF MTSILSLLVR DMFKLIEVAT LVAAGAVDVL LGTPKAYDER IQLARNHKGQ IYIAKLLRDY LSNSELRESH IDCGNVQDAY TLRTIPQVYG AVYDILEFAK SVVENEINAA TDNPLIFDGE VISGGNFHGE PVALVCDYLS IALTDMGNMI ERRIDRLVNP MVNRGLAPFL ATGKEGLNSG YMIWQYTAAA ICNENKVLSH PATSDTIPTS AYQEDHVSMG ATAARKLKKI YSNLINLISI EAMLVKVALE LRRPLKSSEK VEKFFEKIEI QMNGDRYFGD DFNNVKEKII LEVER
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