Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1736 |
Symbol | uvrC |
ID | 5297078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1725799 |
End bp | 1727451 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640770008 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001306960 |
Protein GI | 150021606 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00115993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAGATA GAGAAATATT AAAAAATATT CCTGAGAAAC CTGGTGTATA TATTTTTAAA AGGGATAAAG AATATGTTTA TATTGGAAAG TCGAAAAATT TAAAAAAGCG ACTTAATTCT CATTTTTCTT TTAAAGAAGA AAAAAGTCGG CTTATAGTTG AAGAATCAAA TAAATTAGAG ACTATAATAG TAAAAAATGA GAAAGAATCA TTGCTTTTAG AAGCAACATT AATTTACAAA TATAAACCAA AGTATAATGT TATGCTAAAA GAAAGTGAAC CGTATCCATA CATAAGAATT TCATCTGATG TTTTTCCTTA TGTTGAAGTA ACTAGAAATA GAGATAAAGA TGGTAAATAT TTCGGGCCGT ATACAAATGT AAAATTTACA AGGTTGTTTT TAGAAGTCTT GCAAAAGATT TTGAATTTTA GAACGTGTAA AAAAAATATT GAGAAAATAA AAAAGCCATG TTTGAATTAT TACTTAAAAA CGTGTGTAGC GCCGTGTGTA GATGAAAACA AAAATTTTAA AATGTATGGT GAGATAATTA AACGTTTGGA AGAGGTTTTA AGTGGTGATT ATGAATATAT TAGGAATTTT ATTGAAGCAA AAATGTACCA TCATGCGAAA ATGCTAGATT TTGAGAATGC AGCAAAATAT AGAGATGTGT TACTAGCATT TAATAATATT ATGATAAATC AGGGGATTGT TTTAAGGGAT AAAAGAAATG TGGACTACAT TGTTTTTAAA GATAACATGT TTTTAGTCTT AAAGGTTAGA AGTGGTGTGT TAACTTCAAA ACTTCTTTAT GAAGCTTCAT TAACTTTTGA AGAATTTATA TATCAGTTTT ATTATGGTAT GAAAAGTGAT TTGCCAAATA AAATAGTTGT CTCAAAACAA ATTAATTTGA ATTTTGATGT TCCAATAATT GTGTGTAGAG AGGAAGACGA TAAATATCTT TTAGAAATAG CTTTAGAGAA TTTAACTGAG CATATTAAAT CAATTAATTT TAGTAAAGAT ATTTTAATTA AGATGAAAGA GATTTTAAAT TTAAAAAAAA TTCCATTTAG GATTGAGGGG ACAGATATTT CACATAGAAA TGGTAGATTT ACAGTTGCTT CACTGATTGT TTTTGAAAAT GGATATCCAA AAAAAGATGA ATATAGAAGA TATAAGCTTG GGGACATTTT AGATGATTTT GAAAGTATTA GAATTTTTAT TAGAAAAAGA TATACAAAAC ACCGACCACC AGATTTATTT TTTGTGGATG GTGGTAAGGG ACAAGTTAAT GCAGCAATTG GCGAATTTAA TAAAATGAAT ATTGATATAG ATGTTGTTGG AATTGCAAAG GAGGAAGAAG TAATAGTTAC TAAAAATAAG AGCTTTAAAC TTGATCCAAC TGATGTTGTG TTAAGAACTT TAATTTTTGT AAGAGATGAA ACTCATAGAG TTGCAAATTC TTTTAGTGGA AAGTTAAAAA ATAATGAGTA TAAAGTTAGT AAATTGGATA GTATTAAAGG AATTGGGCCA AAAAGAAAAA AACAGTTACT TATGAAATTT GGAACACTCA AAAACATTAA AAGTGCATCA TTAGAGGAAC TTGAAGAAAT TGTAGGAAAA ACAATAGCGT TAAGAATTAA GGAAGAATTG TGA
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Protein sequence | MIDREILKNI PEKPGVYIFK RDKEYVYIGK SKNLKKRLNS HFSFKEEKSR LIVEESNKLE TIIVKNEKES LLLEATLIYK YKPKYNVMLK ESEPYPYIRI SSDVFPYVEV TRNRDKDGKY FGPYTNVKFT RLFLEVLQKI LNFRTCKKNI EKIKKPCLNY YLKTCVAPCV DENKNFKMYG EIIKRLEEVL SGDYEYIRNF IEAKMYHHAK MLDFENAAKY RDVLLAFNNI MINQGIVLRD KRNVDYIVFK DNMFLVLKVR SGVLTSKLLY EASLTFEEFI YQFYYGMKSD LPNKIVVSKQ INLNFDVPII VCREEDDKYL LEIALENLTE HIKSINFSKD ILIKMKEILN LKKIPFRIEG TDISHRNGRF TVASLIVFEN GYPKKDEYRR YKLGDILDDF ESIRIFIRKR YTKHRPPDLF FVDGGKGQVN AAIGEFNKMN IDIDVVGIAK EEEVIVTKNK SFKLDPTDVV LRTLIFVRDE THRVANSFSG KLKNNEYKVS KLDSIKGIGP KRKKQLLMKF GTLKNIKSAS LEELEEIVGK TIALRIKEEL
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