| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1616 |
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| Symbol | |
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| ID | 5297468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1604276 |
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| End bp | 1605565 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769893 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001306845 |
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| Protein GI | 150021491 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.225919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGCAT CTGTAAAAAG AAAAGTTAAA GAATCCATTT TGGCATATTT GTTTTTATTG
CCGTCATTGA TTGTTTTGGG AATTTTTGTG TTCTGGCCGG TTGGGTTTTC ATTTGTATTA
AGTTTTTTTA AATGGGATTT TCGAAATATG AAATCTCCTT ATTTTAATGG AATTGATAAT
TACCTGAAGA TTTTTGAGTT TAATTATCCC CCAAAGTTTT CGTTTTGGAA TGGATTGGTA
TATTCAATTT CCTATGTGTT TTTGGCAATT GTTATTGTTT TAATTTTTTA TTCTATTTTA
AATCTTTTAA AAAGAAAGAA TTTTTCCATC TTTTTAATTA ATATCGGAGT AATTTTTATA
TCTTTGTTTT TTATAAGTAA AGCTAATGTA TATTTAATGT TGTTACTTGA TATTTTTCTG
TTTGGAGTTG TTTTATTTGA TTTTAGAGAT AGTTCAATAA AAAGTATGTT TAGAAAATTA
GTTTGGATAA ATGTTTCATC AATAATATTT GTTTATGTCT TACTGGAAAC TAGTAAAATT
AGTCAGAATG GATTATTTAT GTTTTTTATG GATGCAAAAG ATAAAAATTT ATTTATGAAG
GCGCTTGTCA ATACCTTTTA TTATGTTATT TTAACAGTTC CTATAACCCT TTTGTTATCA
TTAATTGTCG CAGTGCTTTT AAATTCGAAT GTTAGATTTA AGGTGTTTTT TAGAACTAGT
TATTTTATCC CATTTGTTAC TTCAGTGGTT GCTGTTTCTT TGGTTTGGAA GTGGATTTTT
AGCGATGAAT TTGGTCTGTT AAATTATTTT CTTTCATGGT TTAACATAGA AGGAATAAGA
TGGTTGAAAG ATGAAAAATG GACAATTCCT ACAATTGCGA TTGTTTCTAT TTGGAAACAA
ATTGGGTATG ACGCAATTAT ATTTCTAGCT GGTCTTCAAA ATATTGATCA ATTTTATTAT
GAAGCTGCTG AAGTGGATGG TGCAAATTCT TGGCAAAAAT TTATTAAAAT TACCTGGCCC
CTTTTATCTC CTACAACTTT CTTTTTATTA ATAGTATCAA TGATAGGTGC GTTTAAGGTA
TTTGCACAGG TTTATGTTTT GTACGATGGA CTTCCAGGAC CTTATAATAA CAGTGGAATG
ACTATGGTAT ATTATGTGTT CGATTTGTTT TACAGACAGC AAAGGATGGG TATAGCAAGT
GCAGCTGCTT ATTTGTTGTT TGCGGTAATT TTAGTGTTTA CTGCAATTCA ATATAAAGTT
GGTAATAAAG TTGTAGAATA CGTGTCGTGA
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| Protein sequence | MKASVKRKVK ESILAYLFLL PSLIVLGIFV FWPVGFSFVL SFFKWDFRNM KSPYFNGIDN
YLKIFEFNYP PKFSFWNGLV YSISYVFLAI VIVLIFYSIL NLLKRKNFSI FLINIGVIFI
SLFFISKANV YLMLLLDIFL FGVVLFDFRD SSIKSMFRKL VWINVSSIIF VYVLLETSKI
SQNGLFMFFM DAKDKNLFMK ALVNTFYYVI LTVPITLLLS LIVAVLLNSN VRFKVFFRTS
YFIPFVTSVV AVSLVWKWIF SDEFGLLNYF LSWFNIEGIR WLKDEKWTIP TIAIVSIWKQ
IGYDAIIFLA GLQNIDQFYY EAAEVDGANS WQKFIKITWP LLSPTTFFLL IVSMIGAFKV
FAQVYVLYDG LPGPYNNSGM TMVYYVFDLF YRQQRMGIAS AAAYLLFAVI LVFTAIQYKV
GNKVVEYVS
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