Gene Tmel_1556 details

Gene Information

• Locus tag: Tmel_1556
• ID: 5296640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1544039
• End bp: 1544707
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640769833
• Product: hypothetical protein
• Protein accession: YP_001306786
• Protein GI: 150021432
• COG category: [S] Function unknown
• COG ID: [COG1655] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATCGT TGTGGGATAA GACATATAAA TGTCCTATTT GTGGGAATGA GTTTACAAGT 
AAAAAGGTGA GAATAGATTC TGTGAAGATA TCGGGATACG ATGATGATTT GAAACCAAAT 
TATGTAGAGG TGAACCCTTT TTTGTATGAA ATAGTCGTGT GTTCCAACTG TTGCTATGCA 
GAATATGAAC CGAAATTTGA GGAAAATGTT AATATATTGG AAAAAGAAAA GATAGTAGAT 
GCATTGGAAA AGTTGAAGGG GAAACTTTCA AATGTAAAGA AGCATTTTAC AGGTGAAAGA 
GATATTGATT TAGCTTTAAA GGCTTATGGA ATCGTTGTGA TATTGTCAAC GGTTACTAAA 
AGATATTGTA AGCTTGCAGA TGCATATTTG AAAATCGCTT GGTTGTTTAG AGAAAAAGAA 
GATAAAGAAC AGGAAAATAT TGCACTTGCT CATGCATTGA GAAGTTTTGA GGAGTGTTAT 
TTAAAATCTA ATCTTCCTGA AGGTAAACCC GAGGAAAAAG TGTTATTTTA CCTTGGAGAG 
TTAAATAGGT ATTTTGAAAG AAGAGCTGAG GCGGTAAAGT GGTTTTCTAT TCTTGTAAAA 
AAGTACGGAA GAAGTTCGTC TTATTATGCA AAGGTGGGAA GAGATAGATG GCAAAGTTTA 
CGGCAATAA 

 

Protein sequence

MESLWDKTYK CPICGNEFTS KKVRIDSVKI SGYDDDLKPN YVEVNPFLYE IVVCSNCCYA 
EYEPKFEENV NILEKEKIVD ALEKLKGKLS NVKKHFTGER DIDLALKAYG IVVILSTVTK 
RYCKLADAYL KIAWLFREKE DKEQENIALA HALRSFEECY LKSNLPEGKP EEKVLFYLGE 
LNRYFERRAE AVKWFSILVK KYGRSSSYYA KVGRDRWQSL RQ