Gene Tmel_1554 details

Gene Information

• Locus tag: Tmel_1554
• ID: 5296612
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1542366
• End bp: 1543148
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640769831
• Product: hypothetical protein
• Protein accession: YP_001306784
• Protein GI: 150021430

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.66635
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGTTTG TGGTTACAAC ATCTTACAAT CCAAATAGAG AACTTGTAGA GAAAGCAAAA 
AAACTGGCGA AAGAATACGG CGTAAAATAT GTTAATAGAA ATCATCTTAC TAAATATATA 
AAAAGAAGTC TGATTGATTT TTATTATGTT ATTGATAAAA AGGGTATGCT AAGTATTAAG 
TGGGAAGATG GAGAGTTCTT TTTTCATCAA GGTATAGCGA AAATTAGAAT GGAAAATATA 
AAGCATGGGC AAAAAGATTA TCTTATAGAA GCAATTAGTC CAAAAGAAAG TGACATAGTT 
TATGATGCAA CATGTGGATT AGCTTCTGAA GCGCTTTTAA TAGCAAATTA TGCGAAAAAG 
GTTGTGGCAA CGGAGGGCTC AAAGCATATA TATAGAGTGG TGAAATGGGG ACTTTTATAT 
TACATTTCAG GGGAAAATTG GGTTAATAAT GCAAAGAAAA AGATAGAGTT GGTAAATGAA 
AATTATAAAA GTTATATTAG AAGAGTAGAA GATAATGCTT TTGATATAGT TTATTGTGAC 
CCTATGTTTG AAAATCCAAT TTACGAGAGT AATTCGTTAA ATCCTCTAAG ATCGTTTGCA 
ATTTATGAGT CCTTGAATAC CGAGGATTTA GAAGAGATGT TGAGAATTTC AAGAAAAAAG 
GTAGTAATAA AAACATTAAA GAAAGATAGC CTATATGATA AGATAAAGGA GTATTTTGAT 
AAAGAATATT TGGTTAGGAA AAATGGTGTT GTATATGGAG TAATAAATAA ATTGGAGGTG 
TAG 

 

Protein sequence

MRFVVTTSYN PNRELVEKAK KLAKEYGVKY VNRNHLTKYI KRSLIDFYYV IDKKGMLSIK 
WEDGEFFFHQ GIAKIRMENI KHGQKDYLIE AISPKESDIV YDATCGLASE ALLIANYAKK 
VVATEGSKHI YRVVKWGLLY YISGENWVNN AKKKIELVNE NYKSYIRRVE DNAFDIVYCD 
PMFENPIYES NSLNPLRSFA IYESLNTEDL EEMLRISRKK VVIKTLKKDS LYDKIKEYFD 
KEYLVRKNGV VYGVINKLEV