Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1549 |
Symbol | prfB |
ID | 5296738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1539324 |
End bp | 1540433 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769826 |
Product | peptide chain release factor 2 |
Protein accession | YP_001306779 |
Protein GI | 150021425 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.168139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATT ACGAATTAAA ACAGAGAATT GATGAAGTGA AGAAAAGATA TGAAGATATT GTAAAAGTAT TTCACCCAGA AGATAAAAAA AAGGAATTGG AAGAACTTGA AAAATTAATG GGTGAGTCTG ATTTTTGGAA TGATCAAAAA AGAGCAAAGG AGATTTCTCA AAATGCTCAA AGGATTAGAA AGATAATAGA TGATATGGTA GATATTGAGA ATAAACTTGA AGATTTGGAG GCGGGTTTAG AACTTTTAGA AGAAGATGCA ACGTTTTTGG ATACTATAAA ACAACTAATT GATGATATAG AGAGAAAGGT CAAAACATTC GAACTTGAAT TGATACTAAA TGAGAAGTTT GACTCGAGTA ACGCATATCT TTCCATACAT CCTGGGGCAG GTGGAACGGA ATCGCAGGAT TGGGCATCTA TGTTGCTTAG AATGTATATG AGATGGGCTG AAAGAAGAGG ATTTGATGTT CAAATAGTTG ACTATCAACC GGGAGAAGAG GCGGGAATAA AAAGTGCAAT GTTGTATATA AAAGGAGAAT ATGTGTATGG ATATCTTAAG TACGAAAGAG GAGTACACAG GTTAGTTAGA ATATCTCCAT TTGATGCTAA TAAAAGGAGG CATACATCTT TTGCATCGGT TAATGTTATG CCTGAAATAG AGGACGATAT TGATGTAGAA ATTAATCCGG AAGATTTGAG GATAGACACA TATAGAGCTT CTGGTGCAGG TGGCCAATAT GTAAATAAAA CTGAATCGGC CGTTAGAATA ACACATATAC CAACAGGTAT AGTAGTTACT TGTCAGACAG AAAGATCGCA ATTACAAAAC AAAGAAACTG CTATGAAAGT TTTAAAAGCT AGGTTGTATC AATTAGAATT GGAAAAAAGA CAAAAACAAT TAGAGGAAAT ACAAGGAGAG CTGAAAGATA TTTCATGGGG GAATCAAATT AGATCTTATG TTTTTCAACC GTACACAATG GTAAAAGATC ATAGAACCAA TGTAGAGACT GGTAACATTG ATGCAGTAAT GGATGGAGAT ATAGATATTT TTATTGAAAG TGAATTAATT TTCTTTGCAA AAAGTAAAAA CAAAAAATAG
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Protein sequence | MIDYELKQRI DEVKKRYEDI VKVFHPEDKK KELEELEKLM GESDFWNDQK RAKEISQNAQ RIRKIIDDMV DIENKLEDLE AGLELLEEDA TFLDTIKQLI DDIERKVKTF ELELILNEKF DSSNAYLSIH PGAGGTESQD WASMLLRMYM RWAERRGFDV QIVDYQPGEE AGIKSAMLYI KGEYVYGYLK YERGVHRLVR ISPFDANKRR HTSFASVNVM PEIEDDIDVE INPEDLRIDT YRASGAGGQY VNKTESAVRI THIPTGIVVT CQTERSQLQN KETAMKVLKA RLYQLELEKR QKQLEEIQGE LKDISWGNQI RSYVFQPYTM VKDHRTNVET GNIDAVMDGD IDIFIESELI FFAKSKNKK
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