| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1344 |
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| Symbol | |
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| ID | 5297455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1352013 |
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| End bp | 1353410 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 640769619 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001306578 |
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| Protein GI | 150021224 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.549291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG ATTTATATGT AAAACTTCCA TATTATACAC ATTTAAAATC TCCCACTAGT
TTAACTTTTG AAATACAAAT TCCAAAATCT AGCAACAAAT ACCTTTACAT TCCACAAATA
GATGCATCAT ATATTGAAAT TTTAGCAAAT AACACAACCA TATTAAAAAA AGGTTATTCA
TCCAAAGCGG GCCATTTCTT TTATACGCCA TATTTTATAC CTCTACCTCC AAAAATTTCT
ACATTAAAAA TTAAATTAAG CGGTGTATAT GAAATTGGTA TAGAATTTCC CATATACGTT
GTAGATGAAT CTCAAAAATA TAAATTTTGG ATTCTTAACT TCTTAACATT CCACAGTACA
CTCATACTTA TCGGCATTTT CATCTCCCTA TCTATTATAC TTTACTTACT ATCAAAAAGT
ACAACTTCAT TAAATAAAAA GAAGATATTT CATTACTTTA GTCTGTCATC AATATTTGCA
AGTATATGGA TAATTGATCT GTTACCTATA AGTGATTTTG AAAGTATTCA AGGTTTCTTA
AAATTCAAAA AATTGTTTAT TATAAGCTTA TATCTAGGTT ATTCATTTTT ACTAAAGGGA
AGTCTTATAT TTTTCTATTA TTTAAACAAA CTAGGAAATT TTCTGGTTTA TGCTTTTTAT
TTTATGGCAC TTTTATTACT TTTTCAAACT AATATATTAT CACTTCATTT ATTACATAAT
TACTTTTCTG TAATATTTAT AATATCATCT ATTTTCCTTC TTTATTTATA CTTTAAGAAA
AAAACCCAAA ACTATTACCT ATTTTTTATA CTAACACTAT TTATCCTAAC TACTATACAT
GACACTATAA TCCTTTTATT TGATATTGAA AGCAAACTTT TAAGTCCTAT TGGAGGGATG
ATTCTTTTCT TTGTATTTTC GTATATAATT CTTTATGAAT ACAAATCCAC CACAATTGAA
AAAGAAAAAC TCTATGAAAA AAGTCTAAAA GACAACCTTA CAGGAGCATT CAATCGAAAT
ATCTTTGAAT TTGAAAACTT TTCTTCAGAG GATGTATTTA TATATATTGA TATAAACAAA
TTAAAAGAAA TAAATGACAC ATTTGGTCAC AAAACTGGAG ATAAAATACT CGTAAAATTT
TCACAAACCG TAAAACAATT TATTAGAAAA AATGATTTGC TAATTCGACT AGGTGGCGAT
GAATTCTTAT TAGTCTTAAA AAACTGTTCT AAAAGAAAAG GCAAAAAGAT AATAAATAAC
ATACTAAAAA AATTCAAACA ATCCGATAAA ATTTCTCCTG CTTTTTCATG GGGAATAACG
AAATTTGATA AGTCTGTTGA AAAAACTTTA GAAAACGTAG ATATTTTAAT GTACAAGATG
AAACTAAAAA GAAAATAG
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| Protein sequence | MEKDLYVKLP YYTHLKSPTS LTFEIQIPKS SNKYLYIPQI DASYIEILAN NTTILKKGYS
SKAGHFFYTP YFIPLPPKIS TLKIKLSGVY EIGIEFPIYV VDESQKYKFW ILNFLTFHST
LILIGIFISL SIILYLLSKS TTSLNKKKIF HYFSLSSIFA SIWIIDLLPI SDFESIQGFL
KFKKLFIISL YLGYSFLLKG SLIFFYYLNK LGNFLVYAFY FMALLLLFQT NILSLHLLHN
YFSVIFIISS IFLLYLYFKK KTQNYYLFFI LTLFILTTIH DTIILLFDIE SKLLSPIGGM
ILFFVFSYII LYEYKSTTIE KEKLYEKSLK DNLTGAFNRN IFEFENFSSE DVFIYIDINK
LKEINDTFGH KTGDKILVKF SQTVKQFIRK NDLLIRLGGD EFLLVLKNCS KRKGKKIINN
ILKKFKQSDK ISPAFSWGIT KFDKSVEKTL ENVDILMYKM KLKRK
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