| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1293 |
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| Symbol | |
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| ID | 5297833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1303905 |
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| End bp | 1306022 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640769567 |
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| Product | hypothetical protein |
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| Protein accession | YP_001306527 |
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| Protein GI | 150021173 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR02489] flagellar hook protein FlgE, epsilon proteobacterial
[TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAT CAATTTATAG TGGTGTTACA GGGCTTCAGG GATTTCAACA AGCAATCGAT
GTGGTTGGAA ATAATATTGC AAATGTTAGT ACAATAGGTT TTAAAGCATC ACGTGTTACT
TATGCAACTA CATTTTCGCA AGTTTTAGAA TTGTCAAAAA GAGCTACAGA ACTTACTGGT
GGAACAAATC CCAAGCAAAT AGGTTATGGT GTAAAAGTTG CATCTATTGA CAAAATAATG
TCTCAAGGTA GTTTTCAAAA TACCGGTAAA AAAACAGACT TGGCTATCCG AGGTGATGGA
TTTTTCATTT TAAGAGACGG TGTGGGAAAA ACGTATTATA CAAGAGCTGG AAATTTTGAT
TTAGATGTAA ATGGTACAAT AATACAACCA ACTTCAGGTT TAAAATTACA AGGATGGGTA
GCAGAGCCTG ATCCTGAATC AGGAAAAAGG TTTGTGGATA CAAATAAACC GATTTCCGAT
ATTCAAATTT CTGCGGGGCT TTCAATGGCG GCAAAAAAGA CTACGTCAAT GACTGTAGCA
AATAATCTAG ATGCAAGAGT AGGTCCTGGA AAAACAGTTA TAACTTTATC AGGTTATGGT
GGAAATTCTG TAAATGTAAA AATTATATAC GATAGAGATA AAGGTGGCCT TCAAGATCCA
TTCTCAGATT ATCAAATCTA CAGAGCTAAA GTATACAGTG GAACAGATGA TAACATAGAT
GGGGAGATAT ATATAAAATA TGACAAATTT GGAAACGTAG TACAATCAGG GGCAATTAAG
CAACAATTGA GTGTTACAGC TACTACAGAT GGTAGTTTAA GTTTAACGGG AATAGGTCAA
GAAGATGGGA ATTACACGTT TATAATTAGA GATACAAGTG GAAAAATTCT AGATGTCCAA
ACTGGAAGTG TGAGTTCTGG TAATGTTACT GTGTCATCAG ACCAAATAAA AAATGGAAAT
AATTATGTGA TTGAAGTAGC TAAAGATGTT GTTGATCTTG CTACGCCTGG ATTTATAGCT
TCAACAGAAA GTGGAACGGT TGTTTCCGCA AGTCAATTAG ATTTTACGTA CAATGGAAGC
GATATTACAT CAAATGCCAA GGTATTTGTT AGAGATTCAA ATGGGAATTT AGTCGCACAA
TACGATTTTA CATCAGGATT AACTAATGGG ACAAGTTATA GCTTAACGGG TATATTTGAT
CCTGCCGAAT CTTACACGGT AGAAGTGTAC AATGGTGCAA CAATTAATAG TTTAGTGGTA
CCTGGAAGTG GAGAGCCAAG ATTTTATGAG GCGGATAATC CAACAAACTT TGCTGTAACA
GAGTTCAATT CCCCATTTTA TACAACTTCT GTGCAAGTAT ATGATACTTT GGGAAATGCA
TATACCCTTT ATATAGACTT TGTAAAATTA GCGGCTAATT ATAACGATGG TTCTGCAGAT
TATAAAAATG CTTGGGCGTT TAGGGTGAGA AACGCAACTG GTGAGAATAT TAAATATTTG
ACAAATTACG ATACTGGTCA GGAGATCACT AGTGGAACAG CAGGTGTTAT GACATTTGAC
GAAAGTGGAA GGTTTACTGG ATTGTATGCG TTTGATCCAA CTACTGGTCA AATTAATCGT
GGGGAATCTA TTGATGCAAT AAAGTTTGAT GCTGCAGAAA ATGGTGATGG TGAGGTTAAA
ATTAAATTGT CATTAACTGG TATTACCCAA TTTGCGGCAA CTTCTGATGC ATATGTTGTA
AATCAAAATG GAAATGCTCA AGGTACTTTA GAATCTTTCT CAATCGCAGA AAATGGTGAT
ATTATTGGTA CGTTTAGTAA TGGACTTACT GATAAATTAG GAAAAGTGGC TTTGGCTATT
TTCAACAATC CAGCGGGTCT TTTGGAAGCA GGTAATTCTC TATATACAAA AAGTGCCAAT
AGTGGAAGTG CGATAATCAG ACAACCGGGT TTTGGAGGAG CAGGGGCATT AATTTCAGGT
GCACTTGAAA TGTCTAATGT AGACTTATCA GAGGAATTTA CAAAACTTAT AATTGCTCAA
AGGGGATTTC AAGCTAATGC AAGAGTTGTA ACAACTGCTG ATCAAATTCT TCAAGAAGTT
GTGAATTTGA GGCGATAA
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| Protein sequence | MIRSIYSGVT GLQGFQQAID VVGNNIANVS TIGFKASRVT YATTFSQVLE LSKRATELTG
GTNPKQIGYG VKVASIDKIM SQGSFQNTGK KTDLAIRGDG FFILRDGVGK TYYTRAGNFD
LDVNGTIIQP TSGLKLQGWV AEPDPESGKR FVDTNKPISD IQISAGLSMA AKKTTSMTVA
NNLDARVGPG KTVITLSGYG GNSVNVKIIY DRDKGGLQDP FSDYQIYRAK VYSGTDDNID
GEIYIKYDKF GNVVQSGAIK QQLSVTATTD GSLSLTGIGQ EDGNYTFIIR DTSGKILDVQ
TGSVSSGNVT VSSDQIKNGN NYVIEVAKDV VDLATPGFIA STESGTVVSA SQLDFTYNGS
DITSNAKVFV RDSNGNLVAQ YDFTSGLTNG TSYSLTGIFD PAESYTVEVY NGATINSLVV
PGSGEPRFYE ADNPTNFAVT EFNSPFYTTS VQVYDTLGNA YTLYIDFVKL AANYNDGSAD
YKNAWAFRVR NATGENIKYL TNYDTGQEIT SGTAGVMTFD ESGRFTGLYA FDPTTGQINR
GESIDAIKFD AAENGDGEVK IKLSLTGITQ FAATSDAYVV NQNGNAQGTL ESFSIAENGD
IIGTFSNGLT DKLGKVALAI FNNPAGLLEA GNSLYTKSAN SGSAIIRQPG FGGAGALISG
ALEMSNVDLS EEFTKLIIAQ RGFQANARVV TTADQILQEV VNLRR
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