Gene Tmel_1261 details

Gene Information

• Locus tag: Tmel_1261
• ID: 5297261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 1269991
• End bp: 1270650
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640769534
• Product: TrkA domain-containing protein
• Protein accession: YP_001306495
• Protein GI: 150021141
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTGG TCATAATAGG CGGAGAGAAA ATAGCATATT TTTTGGCAAA GTCATTCTCG 
AGTAAAGGCT ACAAAACATA TCTAGTTAAT AAAGATCAAA AACTTTGTGA GGATTTTGCA 
AGAGACCTCA AAGCAGTGGT TATACACGGT GATGCAACTA AAAAGAAATT GTTAGAACAG 
CTTGATATAG AAGAAGAAGA TATCATAGTT GTTCTTACAA ACAAAGATAA AGAAAACTTA 
ATAATAACAC AATTTGCAAA AAAAATTTTT GGTGTAAAAA ATATAGTAAC TCTTGTAAAT 
AACCCTGATA ATATAGAATT ATTTGAAAAA CTTGGAATAA CAGCTGTTGT TAGTACAACA 
ACTATGCTTC AAAAGGCTGT TGAAAACCTA TTATTTGGAA AGGAGCTAGA AGAATTTTTG 
GCTATAGAAG AAGGCAAATT ATCATTTCTA AAAGTTGATA TACCAGAAAA TTCACAAGCT 
ATTGGAAAAT TCTTAAAAAA TTTAAACCTT CCGCATGAGT GTGTAGTCGG AGGCATTTTA 
AGAAAAGGGG AAGTTATAAT TCCGCATGGA AACACCCAAA TAAAAGCAGG AGATAGATTG 
TATATAGTCA GTCTTCCTAC AGCTCAAACA GAAATATTAA AAATATTAAC GGAGGAATAA 

 

Protein sequence

MKVVIIGGEK IAYFLAKSFS SKGYKTYLVN KDQKLCEDFA RDLKAVVIHG DATKKKLLEQ 
LDIEEEDIIV VLTNKDKENL IITQFAKKIF GVKNIVTLVN NPDNIELFEK LGITAVVSTT 
TMLQKAVENL LFGKELEEFL AIEEGKLSFL KVDIPENSQA IGKFLKNLNL PHECVVGGIL 
RKGEVIIPHG NTQIKAGDRL YIVSLPTAQT EILKILTEE