Gene Tmel_1196 details

Gene Information

• Locus tag: Tmel_1196
• ID: 5297695
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1216171
• End bp: 1216809
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640769473
• Product: peroxiredoxin
• Protein accession: YP_001306435
• Protein GI: 150021081
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.136829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTTAC CACTTATTGG TGAGAAGGTT CCAGAATTTG AGGCAGTTAC AACGAAAGGA 
GTAATTAAAT TTCCAGATGA TTTTAAAGGA AAATGGGTAG TGTTGTTTAG TCATCCTGCA 
GATTTTACTC CCGTTTGTAC AACTGAGTTT TATGCATTTC AAAAAAGGTA TGATGAATTT 
CAAGAGTTGA ACACAGAGCT TGTAGGGTTA AGTATTGATC AGGTTTTTTC ACATATTAAA 
TGGGTTGAAT GGATTAAAGA GAAACTTGGA TTAGAGATAA AATTTCCGGT TATTGCAGAT 
GATAGGGGAA AGATAGCAGA AATGTTGGGA ATGATTCATC CTGCAAAGGG AACAAATACT 
GTAAGAGCAG TGTTTATAAT TGATCCTAAA GGAATTTTAA GAGCGATATT GTATTATCCT 
CAAGAACTTG GAAGAAATAT GGATGAGATT TTGAGAATGG TTAGAGGACT TCAAACAGTA 
GATGAAAATG GAGTAGCTTT ACCTGCAAAT TGGCCAAATA ATGAGTTGGT TAAAGATGAG 
GCGATTGTTC CACCTGCAAA TAATGTTAAA GATGCAGAAA AGAGACTAAA AGAATACGAA 
TGTTATGATT GGTGGTTCTG TCATAAAAAA TTAAAATGA 

 

Protein sequence

MGLPLIGEKV PEFEAVTTKG VIKFPDDFKG KWVVLFSHPA DFTPVCTTEF YAFQKRYDEF 
QELNTELVGL SIDQVFSHIK WVEWIKEKLG LEIKFPVIAD DRGKIAEMLG MIHPAKGTNT 
VRAVFIIDPK GILRAILYYP QELGRNMDEI LRMVRGLQTV DENGVALPAN WPNNELVKDE 
AIVPPANNVK DAEKRLKEYE CYDWWFCHKK LK