| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1088 |
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| Symbol | |
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| ID | 5296972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1112303 |
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| End bp | 1113343 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769371 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001306333 |
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| Protein GI | 150020979 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.41484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAATG GTCATATAGA GTATTTAAAA TCGTTATTGA CAAATGTTGA CATAAAAGGA
TATTTAAGAC ATAGGGAAAG TTCAACCCTT GAGTTTAAAG AAAAGTTTGG ATTTGGGAGC
ATAGAGCATT ATGCTAAAAC AATGGCTGCA TTTGCCAATA ACAAAGGCGG GTATATAATT
TTTGGTATAA AAGACAGTCC AAGGTTGCTA GTAGGAATAA ATCGGAAAAA ATTCAATGAA
ATTAGTCAAG AAAAACTTAC TGGTTTTTTA ATTGAATATT TTTCGCCTGA AATAAAATGG
GAAATGGGTA TTGTGGATAT TGGAGAAAAA TCCTTTGGTT ATATATTTGT TAATGAGTCT
TTAGAAAAAC CGGTGATTTG CAGAAAAGCT AAGGAAAAGT TGAAGTCTGG AGAGATTTAT
TATCGGTATA GAGGTCAAAC AAGAAAAATA GAATTTTCTG AGTTAAGAAA AATTATAGAA
GAATACAGAG AAAGAGAAAG ACAATATTGG ATGAAGCTTA TTGAAAGAAT AGCAAAAATT
GGTCCAACAA ATATTGCATT AGTGGATTTA TTAAATGGAA GTATTGAAAC TACTAGAATA
TCAGGCAAGC AACTTGTCAT AGATAAGTCG CTTTTAAATG AGTTAGCAGA AAAAATTAAT
TTTATTGAAA AAGGTCATTT TGTTGAAACT AGCGGTGAAA CCGCATTAAA AGTTGTAGGG
GAAATACAAG TTGCGAATAA AATAATTGTT CCTGATTTAG ACCCAAATAA AGATTATCCT
TATTTGCAAA AAAAGTTGGC TGAAATGCTA GGAATAAAGC CGTATTATGT ACAGGTATTG
GTATGGAAAT ACAAATTGAA AGGTGACAAA AGATATCATT TAAAATTAGA ATGTGGGAAA
AATAAGATTC ATAAATTTTC TAAATATGCC TATGAAAAGT TGAAAAGTGA GCTCGAAAAA
TTGTCAGAGA GTGATTTAAA GCAATTTTCA CATGAATATG AAAAGTTTAA AAGAGGAAAT
AAGCTTAGTA CACCAGGCTA G
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| Protein sequence | MKNGHIEYLK SLLTNVDIKG YLRHRESSTL EFKEKFGFGS IEHYAKTMAA FANNKGGYII
FGIKDSPRLL VGINRKKFNE ISQEKLTGFL IEYFSPEIKW EMGIVDIGEK SFGYIFVNES
LEKPVICRKA KEKLKSGEIY YRYRGQTRKI EFSELRKIIE EYRERERQYW MKLIERIAKI
GPTNIALVDL LNGSIETTRI SGKQLVIDKS LLNELAEKIN FIEKGHFVET SGETALKVVG
EIQVANKIIV PDLDPNKDYP YLQKKLAEML GIKPYYVQVL VWKYKLKGDK RYHLKLECGK
NKIHKFSKYA YEKLKSELEK LSESDLKQFS HEYEKFKRGN KLSTPG
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