| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1074 |
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| Symbol | |
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| ID | 5297299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1100419 |
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| End bp | 1101849 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 640769357 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001306319 |
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| Protein GI | 150020965 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0510405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA TTGTAAAAAG AGGAATTAAA ACTTTTTCTT GGACTTTGTT TGGTAGTGGT
ATTGGTTTTG TTTTTCAAAT ATTAGCTGCA AAACTTTTGG GTGCTGTAGA ATATGGTAGA
GCAAATGTTA TAATAGGTTT ATCTTTATCT TTTGTAACGA TTTTAAATTT TGGTTTTACA
TGGCTTATAG TAAAGGAGTT AGCAACAAAA CCAAATAAAA AAAATGAAAT ATTGTCTAAA
TTTTTTTATA CATATACATT TTTAGATATT TTGACATTAC CAATAGTATT TTTAGTTATA
TATAAGTTAT TAATAAAAGT GAATATGTAT AACACAAAAA ATGTAATATA TACTATAGTT
TTAATTTATT TCAATCAATT TTTTATACTG TATAGTAAAT ATTTAATTGG TATGAAAAAA
CAGCACTTAG ATGCATTTAT AAAAGGATTT ATTGTAAAAA CAATTAATAT AGCTTTATTT
TTTATATTCT ATTTTAAATT TAATAATTAT ACTTCAATAA TTGTTTCCCA AATCCTCTCG
TTTTTAATAC CGATATATTT ATTATTAAAA GATATTATAA AAATAAAAAT TGATATCCAT
GATTTTATTT ATATTATTAA AAATTCTTGG CAGTTTTACT TATTAACCAT TACATATTCA
TTGTATAATA ATGTATCAAA ATATTTACAA AAAGTATATG TTTCTAATGA ATTTGTTGGA
TACTTATCCT TAGGATTAAC TTTAAGTACT ATAGGAGTAT TATTAGGCGG GGTTTTGGCG
AATTTAGCGA TGCCAGAATT TGCACAATAT TGGAAGAATA AGAATTTTAT TAAATTAAAA
GAATTATTTC AAAAGGTTTC AAGATATAAT ACGTATATAA TGTTACCAAT AGTGATTTTT
ATAATATCAA ATTTAGATAT ATTATTAAAA TTATTGGGGG AAGATTATAA AAAAGGAAAT
TTTATTATTT CTATATTAGT AATAGCTTCT TTTTTTAATT CCTTTGTTGG CCCAAATGGC
ACGCTATTAA ATATGTCTGA TAAGCAAAAA TTTGAAATTA TAAACGGTTT ATCAACAATA
ATAATTGGTT TTGTTTTAGG AATAATATTA GGTCCTCGGT ATAAATGGGG AATTGCAATT
TCAATAGCTT TTACGACAGT TTTTGTTAAT GTATTAAAAT TTATTGAAGT GGTAATGATA
TATAAGATAT ATCCTTACAA TTCAAAAACA TTATTATGCA TATTTTTATC AGGCATTATT
TCAATATTAG CATTTAGTGT TACGAAAAAC ATAGACAATA TAATTATATG GTTTTTAGTA
AACTCTTTTG TCATAATTTT ATTAATTGTG ATAACATTTG TTTTTTCTCC TATTACAGAA
GATAGAGAAA TAATAAAAAA AATAATGAAA ACTTTTGGGA GGTTGAAATA A
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| Protein sequence | MAAIVKRGIK TFSWTLFGSG IGFVFQILAA KLLGAVEYGR ANVIIGLSLS FVTILNFGFT
WLIVKELATK PNKKNEILSK FFYTYTFLDI LTLPIVFLVI YKLLIKVNMY NTKNVIYTIV
LIYFNQFFIL YSKYLIGMKK QHLDAFIKGF IVKTINIALF FIFYFKFNNY TSIIVSQILS
FLIPIYLLLK DIIKIKIDIH DFIYIIKNSW QFYLLTITYS LYNNVSKYLQ KVYVSNEFVG
YLSLGLTLST IGVLLGGVLA NLAMPEFAQY WKNKNFIKLK ELFQKVSRYN TYIMLPIVIF
IISNLDILLK LLGEDYKKGN FIISILVIAS FFNSFVGPNG TLLNMSDKQK FEIINGLSTI
IIGFVLGIIL GPRYKWGIAI SIAFTTVFVN VLKFIEVVMI YKIYPYNSKT LLCIFLSGII
SILAFSVTKN IDNIIIWFLV NSFVIILLIV ITFVFSPITE DREIIKKIMK TFGRLK
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