| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1017 |
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| Symbol | |
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| ID | 5296581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1043423 |
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| End bp | 1044676 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640769301 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001306263 |
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| Protein GI | 150020909 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0416471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGT TAGTTAGTAT TTTTTTAACA CTTATCATTG GATTGGTTTT TTCACAAGTT
GAAGTTGTTT TTTGGCATGG ACTATCTCGA GATCCAGACA AAAGTAGTAT TGAAAAGATC
ATTAAAGAGT TTGAAAATGA AAATCCAGAC ATAAAAGTAA AAGTGGTAAT TGTTCCAGCA
GCAGAAACTG ATTCAACAAA ACTATTAACA GCTGTAGCAG CTGGCACAGG ACCAGATCTT
GTCTACTTAG ACAGATTTAC AGTTTCTCAA AGAGCTGCAA ACAACGTACT CGAACCTATG
GAAGATTACC TTAAAAAAAT AGGTATTGAT ATATCTGAAA TGAAAAATCA ATTCTACAGT
TTTGCGATTG AAGAATGTAT TTTCAACGGA AAAATGTGGG CTTTGCCATT TGATACAGAT
GTGAGAATCC TACTCTATAA TGCAAAACTT CTAAAAAAAG CAGGATACAA CGAACCACCA
AAAACTGTCT ACGAAATGAT CAACGTTGCG GATAAATTAA CAGTCGAAGG TAAAAGAGGA
AGGTATGAAA CCGTTGGATT TATCCCCTGG TATGCCCAAG GATGGCCTTA TACATGGATT
TTCGCATTCG AGGGAAAAAT CTTTGATAAA GAAAGCGGAA AATTTATATT TGCAACTGAT
CCAGGTGTAA TTGAAGCATA CAAATGGCAA GAAGAATGGG CAAATAGATT TGGTTATGAA
GCTCTAAATG CATTTGGCTC GTTGCAAATT GGAGATTTAA ATCCATTTAC AGCAGGAAAA
TTGGCAATGA TTGTAGATGG AAATTGGACT ATTTCAGGAT TGAAAATGTT CGCACCAAAA
GACTTTGAAT ACAAAATAAG TGGCATACCA ACAAAAAGTG GAAAACCCGT CACCTGGGCA
GGAGGATGGA GCCTTGCTAT ACCAAGAGGT GCAAAACACA AAGAAGCGGC TGCAAAACTT
GCATACTATA TTGCAACAAA AGGACAAGTA ATATACTGCG TTGATACATT ACATCTTCCT
ACATATAAAC CAGCTGTAAA AAGCTTTTTA GAAAAAGACC CATCCCAAAA GGTATTTGTA
GAGCTTCTTG ACAATGCAAA AACAAGACCA CCTCTTCCAG TAGGAGCATT ACTTTGGGAT
AAACTTGTTG AAGCAAGGGA TTATGTATTA ACAGGTAAAA AATCAGTAGA ACAAGCACTT
TTAGATGCTC AAAAAGAAGT ACAAGAAGCA TACGACAAAA TTTTGGGTAA ATAG
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| Protein sequence | MKKLVSIFLT LIIGLVFSQV EVVFWHGLSR DPDKSSIEKI IKEFENENPD IKVKVVIVPA
AETDSTKLLT AVAAGTGPDL VYLDRFTVSQ RAANNVLEPM EDYLKKIGID ISEMKNQFYS
FAIEECIFNG KMWALPFDTD VRILLYNAKL LKKAGYNEPP KTVYEMINVA DKLTVEGKRG
RYETVGFIPW YAQGWPYTWI FAFEGKIFDK ESGKFIFATD PGVIEAYKWQ EEWANRFGYE
ALNAFGSLQI GDLNPFTAGK LAMIVDGNWT ISGLKMFAPK DFEYKISGIP TKSGKPVTWA
GGWSLAIPRG AKHKEAAAKL AYYIATKGQV IYCVDTLHLP TYKPAVKSFL EKDPSQKVFV
ELLDNAKTRP PLPVGALLWD KLVEARDYVL TGKKSVEQAL LDAQKEVQEA YDKILGK
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