Gene Tmel_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0917 
Symbol 
ID5296490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp953847 
End bp954938 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content32% 
IMG OID640769196 
Productthreonyl/alanyl tRNA synthetase, SAD 
Protein accessionYP_001306163 
Protein GI150020809 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGTCT TTGTTGAAAA AGTAGAAAAA GAAGGTGATA GATATTATGC TATTAGTTCA 
AATAGCCCTT TTTATGTGGA TTACAAAGGA GGACAGCTAG GTGATAGAGG ATATATTGGC
AATTCAAGGG TTTTGAGAGT GTTTGAAAAG GATGGAAAAA TATATCATGA GATTGATAGG
GAGATAGAAG AGGGAAGTTA TGAAATAGAG ATTGATGAAG AACATAGAAA TTTTGTAAAA
GCTCACCATA CAGCTCAGCA TATTTTATCT GCGGCTTTAC ATGAAATCGC GGAAATAAAT
ACTGTAGGCT TTAGAATGGG GTTTGAATAC ACCACTGTAG ATTTGGATGT TCCGTTTGTG
AACGATATGG TGTTAAAGGA AGCGGAGGAA CTTTCAAATG ATGTTGTAAA AAGGTGTATT
AATGTAGAAG AGGTATTGGT TGATAGGGAA GATGTTGGTA GATTTAAATT AAGAAAACCG
TTAAGTGAAA AAGTTGAGGG AAAAGTAAGA ATTATTAAAA TAGGAGAATT TGACTATTCT
CCATGTGGGG GCTTTCATGT GAAAAATACC GGAGAAATTG GTGTAATTAA GGTGTTGAAA
CAAGAAAAGA TAAAGGGAAA TCTAACAAGA CTTTATTTTG TAGCTTCTAG CTTAGCTTTA
AAATATTTCT GGAAATATAA TAATATTTTA AGAAATATTT CGAAGACCTT AACTAGTTCG
ATTTCTGAAA TTGAAGAGAA GGTTTCAAAG ACATTAGATG AGTTAAAAAT GTGTGCAACA
AAAGTTGATA AATTATCTTC TGAACTTGCA AAGTACAAAG TGAAAGAATT AAAGAAAAAA
GGGAATGTGT ATTACCTTGA AGGTGAAAGA AATATTTTAA GGTATATACC TAAATATTTT
GATAAAGAAG GGGCTTTATT GGTGTTGTAT GATGGTAGAA GTTATAATTT TACTTCTACT
GGTGGATATA ACGTTAAGAA AATTATAGAA CAACTGAAAA ACATTTACGG TGGAAGTGGT
GGAGGAAGCA AAGTTAAAGG AAATTATGTA AGTGATATTG ATTTTAATAG GTTGTTGGAG
GTGTTAGTAT GA
 
Protein sequence
MEVFVEKVEK EGDRYYAISS NSPFYVDYKG GQLGDRGYIG NSRVLRVFEK DGKIYHEIDR 
EIEEGSYEIE IDEEHRNFVK AHHTAQHILS AALHEIAEIN TVGFRMGFEY TTVDLDVPFV
NDMVLKEAEE LSNDVVKRCI NVEEVLVDRE DVGRFKLRKP LSEKVEGKVR IIKIGEFDYS
PCGGFHVKNT GEIGVIKVLK QEKIKGNLTR LYFVASSLAL KYFWKYNNIL RNISKTLTSS
ISEIEEKVSK TLDELKMCAT KVDKLSSELA KYKVKELKKK GNVYYLEGER NILRYIPKYF
DKEGALLVLY DGRSYNFTST GGYNVKKIIE QLKNIYGGSG GGSKVKGNYV SDIDFNRLLE
VLV