| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0859 |
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| Symbol | |
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| ID | 5298391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 895785 |
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| End bp | 896621 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769137 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_001306105 |
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| Protein GI | 150020751 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0252583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTGG GTTTTAGTAT TTTAATTGAT TTATTTTTCG GAGAATTTCC AAATTTTATA
CATCCCGTGG TCTATATGGG GGTTATTGGA AAACGATTTG AGAAGATAAA AGGATTTCGA
TTTTTCTTTG GAATGTTATC ACTACTTTTA GAGATTTCTT TTTGGCTTTT TCTGTGCAAA
ATGTTAGTGA AAGTAAATTA CTTTTTTGAA CTTTATTTTC TTTCATCAAC GTTTTCAATA
AGAGCGTTGT ATGTACATGT AAAAAGATGC AAAACAAATA ATTTAAAAAT CCTACGAAGA
AATGTTTCCT TTATAGTTAG TAGAGATGTT AGTTTTCTTG ACAAAAATCA TCTTTATTCT
GCTGCTTTAG AAAGTCTTTC CGAGAATATA TCTGATAGTA TAGTTGCTCC ACTGTTTTAT
TATTTGATTT TTGGAATATA TGGTGCGTTA TTGTATAGGG TTGTAAATAC ATACGATGCA
TTATTCGGTT ATAGGACAGA AAGATATGAG TGGTTTGGAA AATTTCCTGC AAGATTTGAT
GATTTTTTAA ATTTTATTCC TGCAAGACTT ACCGCATTTC TTATTATCTT ATTCAACTTT
AGAGCTATAG AATATCTAAA AAGATATAGG AAATTAAAGA TAAATTCAAT GTATCCAATG
GCGGCATTTG CTGGTGTTTT AGGGTTGGGG TTTGAAAAGA TAGGTGTTTA CAAATTAGAA
GGTAAAGGTG TTGAACTTGG AGATATAGAT AGAGGGTTAA GATTATACAA AAAGGTGGTT
TTTTTATGGA TAGTTATATT AATGGTCATG GTGGTATTGA AAGAAAGGAT TTTTTAG
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| Protein sequence | MLLGFSILID LFFGEFPNFI HPVVYMGVIG KRFEKIKGFR FFFGMLSLLL EISFWLFLCK
MLVKVNYFFE LYFLSSTFSI RALYVHVKRC KTNNLKILRR NVSFIVSRDV SFLDKNHLYS
AALESLSENI SDSIVAPLFY YLIFGIYGAL LYRVVNTYDA LFGYRTERYE WFGKFPARFD
DFLNFIPARL TAFLIILFNF RAIEYLKRYR KLKINSMYPM AAFAGVLGLG FEKIGVYKLE
GKGVELGDID RGLRLYKKVV FLWIVILMVM VVLKERIF
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