Gene Tmel_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0796 
Symbol 
ID5298041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp836968 
End bp838242 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content32% 
IMG OID640769074 
Productcitrate transporter 
Protein accessionYP_001306043 
Protein GI150020689 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAGG TATTTGCCAT AGTTGTCGTT GCTATTGCAT ATGGATATAT TATTTTTGGA 
AAAAAGTACA AGGCTCCTAT TGTTTTTGGA CTTGCTATTT TAGTTGCTGC ATTTAGACTT
GTAGAAGGTC TTGAACCTAG TGATATAAGC AAAGTTGTTG ATTTTAACAC TTTGGGTCTT
CTTGCAGGGA TGACTGTTAT TGTTGAATTT TTGAAAAAGA CAGGATTTTT TCAATTTTTG
GCAATTAGAA TTGTAAAGAT AGGCGGGAAA CGCTTTTTCT TAACAATAGC AGGTTTGATG
GTTTTAGTGG CTATTTCGTC TGCTTTTTTA GATAATCTTG TTACTATAAT CCTTATTGCC
CCTATGATTT TTCTTATTAC AGATTCTTTA GGTTTAAATC CTATTCCATT TTTGATGTTA
ACAATTTTTA TAGATAACAT AGGTGGTATG TCAACGTTAA TTGGAAGTCC CTTGAACCTT
GTTCTTGGTT CTGTAAGTGG TTTGGGGTTT AATGACTTTT TAAAAAATAT GTGGTTAATT
ACGATAATAT CATTTATTAT AACCTTGTTT CTTTTTAAGA AATATACGAT TGTTAATAAA
GATGTAGAGG AAAAATTGGA AAAGCTCTCA GAGATAGATG AAAGTAGAGC AATAACAAAT
AAAAAATCTT TAAAATTCAC ACTAGCAGTG TTTTTTGTCG TATTATCTTT GTTTGGATTA
CATCAAGTAA TTGAAGTAGA TTTGTCTTTT GTTGCTCTTT TGGGGGCGAT AGTTGTAATG
TTGTTTCATA AAAAAGAGTT TAATGATATA AGTAGTGAGA TAGATTGGGA TACTCTATTC
TTTTATGCAG GGTTATATAT TTTATCTTAT GCGTTAGAAG AAGTGGGAAT TACTAGCCTT
TTGGCAAATC TATTTTTACC ACTTTCAGGC CGTTTGTTTT TCTCTATATT AGCTATTTTT
GCATTTACTT CTTTTTCTAT TCCATGGCTT AGTGCAGTTC CAGGTACTTT AATTATTGCT
CCGGTAATAA AGATTTTGGT AAATGCCGGC TTTTCCAGTA CTTTTTGGTG GGTATATGCG
GTAAGTGCAA ACCTTGCAAC TAATTTAACG CCACTTGGTG CGGTACAGAA TATAGTTGGA
GTAAACTTAC TTTCCAAGCA AATTGGTAGG AATTTTAGTT TTGGAGAATA CATGAAATGG
GCTTTTAAAC CATTTCTTGC AACAAGTTTG GCGGGTTTTG TTTTTGTGAT TGCAAAACTT
TATTTTGGAG GTTAG
 
Protein sequence
MDKVFAIVVV AIAYGYIIFG KKYKAPIVFG LAILVAAFRL VEGLEPSDIS KVVDFNTLGL 
LAGMTVIVEF LKKTGFFQFL AIRIVKIGGK RFFLTIAGLM VLVAISSAFL DNLVTIILIA
PMIFLITDSL GLNPIPFLML TIFIDNIGGM STLIGSPLNL VLGSVSGLGF NDFLKNMWLI
TIISFIITLF LFKKYTIVNK DVEEKLEKLS EIDESRAITN KKSLKFTLAV FFVVLSLFGL
HQVIEVDLSF VALLGAIVVM LFHKKEFNDI SSEIDWDTLF FYAGLYILSY ALEEVGITSL
LANLFLPLSG RLFFSILAIF AFTSFSIPWL SAVPGTLIIA PVIKILVNAG FSSTFWWVYA
VSANLATNLT PLGAVQNIVG VNLLSKQIGR NFSFGEYMKW AFKPFLATSL AGFVFVIAKL
YFGG