| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0707 |
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| Symbol | |
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| ID | 5297105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 744076 |
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| End bp | 744915 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768987 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001305956 |
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| Protein GI | 150020602 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA GGGTAGGAAC AAGAAAAAGT AAACTTGCAT TAATCCAAAC ACAGTTAGTT
GTAAACAAAC TAAAAGAATT ACTACCCAAT ATAGATTTTG AAATAACCCC TGTTGTTACA
AAAGGAGATA GATTAAAAAC ACCCATAGAT AAAATTGGCG GAAAAGGTGT TTTTGTAAGT
GATATTGAAA AATTAATTCT AGACGATAAG TTAGATATCG CTATCCACAG TATGAAAGAT
CTTCCAAGCA AAATACCTGA TAAACTGTTT TTAACTTCCG TTCTAAAAAG AGAATGCCCA
AATGATGTAT TCATTGGAAA AGAGAACTTT TTCAATCTAA AAAAAGGGGC AAAAATTGGT
ACATCTAGCA AAAGAAGAGC ATTACAAATC AACATGTTAA GACCTGATAT AGAAATAGTC
CCTATCCGTG GAAATGTAGA TACACGCATA AAAAAAATAG GAGAATTAGA CGGTATTGTA
ATTGCGGCAG CGGGAGTAAT CAGGTTGGGA CTAAAAGATA AAATAACAAA TCTTTTTGAA
TTTGAAAAAA TTGTCCCCGC TCCATGTCAA GGAATTTTGG CACTTGAATT TTCAGAAAAA
TTTCTCAAAC CTTTTGAAGA AATAAAAGAT GTAATTGTTG ATCCCAAAAC AGAAGTAGAA
ACTCAAATTG AAAGAAAAAT ACTTTCGCTA CTGAACTTTG ATTGTAATAC ACCTTTTGGT
TTCTACTGCG ATGCTAGCAA AAAAGTCACA TGCTATATGT TCAAAAATAA CGAAAGAAAA
AAATTTACAT TTGAATCACC CGAAATTGAA AAGATTTTAG GAGAGATAAT ATGGGAATAG
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| Protein sequence | MKIRVGTRKS KLALIQTQLV VNKLKELLPN IDFEITPVVT KGDRLKTPID KIGGKGVFVS
DIEKLILDDK LDIAIHSMKD LPSKIPDKLF LTSVLKRECP NDVFIGKENF FNLKKGAKIG
TSSKRRALQI NMLRPDIEIV PIRGNVDTRI KKIGELDGIV IAAAGVIRLG LKDKITNLFE
FEKIVPAPCQ GILALEFSEK FLKPFEEIKD VIVDPKTEVE TQIERKILSL LNFDCNTPFG
FYCDASKKVT CYMFKNNERK KFTFESPEIE KILGEIIWE
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