Gene Tmel_0557 details

Gene Information

• Locus tag: Tmel_0557
• ID: 5297416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 590031
• End bp: 590441
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640768819
• Product: flagellar protein FliS
• Protein accession: YP_001305809
• Protein GI: 150020455
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00232757
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTACA CCGAACAAAT GGTAAAGACT GCAAGTCCTG CTAAACTTAT CGAAATGTTA 
TACCAAAGAG CTATTGAACT TCTTGATATG TCTGTTGAAA GTATAAATAA AAAGGATTTC 
ATTAACGCAA ATGAATATAT TAAAAAATGC CAGGACATTA TCACAGAACT TAATTTATCT 
TTAGATATGG AAAAAGGCGG CGATATTGCT AAAAACCTAA GATCACTTTA CAACTACATG 
TTTAAGGTTC TAGTGGATGC CAATATCAAA AAAGATACTT CAAAAATAAA AGAAGTAAGA 
GAATATCTCT CTGAACTTCT TGAAACATGG CGTGAAGCAA TGAAAAATGT TGGAAATACT 
GCAAATCAGC TTCCAGATCC AAACAGACCA AGACTAAATA TAAGCTTATA A 

 

Protein sequence

MDYTEQMVKT ASPAKLIEML YQRAIELLDM SVESINKKDF INANEYIKKC QDIITELNLS 
LDMEKGGDIA KNLRSLYNYM FKVLVDANIK KDTSKIKEVR EYLSELLETW REAMKNVGNT 
ANQLPDPNRP RLNISL