| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0490 |
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| Symbol | |
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| ID | 5298061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 515973 |
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| End bp | 517934 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768751 |
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| Product | hydrogenase large subunit |
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| Protein accession | YP_001305742 |
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| Protein GI | 150020388 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TAGTAAATGG AAAAGAAACC ATTATTAATG ATAATGCAAA AAATCTTTTA
GAAGCTTTAA AAGAAGTGGG AATTGAAATA CCAAATCTCT GTTATTTATC AGAAACATCC
ATATATGGTG CATGTAGAAT GTGTTTAGTT GAAGTTGATA ATCAGATTAC AACTTCTTGT
TCCATAAAGC CATATGAAGG AATGAACGTA AAAACACATA CACCTGAGAT ATATGAAATG
AGAAGGGGAA TATTAGAACT TTTACTTGCA TCACACAATA GAGATTGTAC AACTTGTGAA
AGAAATGGAA ATTGTAAATT ACAAAAATAC GCAGAAGAAT TTGGTATTAG AAAGGTAAGG
TTTGATAAGA TTGACAAACC AAACATCATA GATTACTCTT CCATAATTAT TAGGGATAAT
TCAAAGTGTA TTCTTTGTGG TGATTGTGTG AGAGTTTGTG ATGAGATTCA ATCAATAGGT
GCTATTGATT TTGCATTTAG AGGTTTTGAA GCACAAGTTA TGCCTGCTTT CGGTGAAGAA
CTTGCAAATA CAGCGTGTGT GCTTTGTGGC CAATGTGTAG CTCACTGTCC AACTGGAGCA
TTGACTTTTA GGAATGATAT ACAAAAGGTA TACAAAGCAA TGGAGGAAGA AAAATTTGTA
ATTGGAATGA TTGCACCGGC AGTTAGAGCT TCTATCCAGG AGGAACTTGG ATTAGATGGA
GATGTTGTTA CCGCAGGGCG AATTGTTAAC TTTTTAAAAA TGATAGGTTT TAAGAAAGTG
TTTGATGTTT CGTTTGCGGC GGATTTGGTT GCATACGAAG AAGCGCACGA ATTTAAAGAA
AGGCTTGAAA GAGGAGAAAA ATTACCACAA TTTACTTCAT GCTGTCCAGG TTGGGTAAAA
TTTGCAGAGC ATAATTATCC TGAACTTTTG GATAATCTAT CGTCTGTGAA ATCTCCACAA
CAAGCACTAG GAAGTGTAAT AAAGAGGATA TATGCAAAAG AAATGGGAAT AGATCCGAAA
GATATATTCC TGGTATCCAT AATGCCATGT ACAGCTAAAA AGTTTGAAGC AGAAAGAGAA
GAATTTGCTG GAGAAGTTGA TGTGGTTATT ACTACAAAAG AGTTATCACA AATAATTAGG
TCAAGTGGTT TTGATCTAAA AAGTATTCCC CCGATTCCAT TTGACAGACC ATATGGTCTT
TCATCACAAG CTGGTCTAAG CTTTGGAAAG ACTGGAGGAG TATTTTCGAG TGTTCTAAAA
GTTCTAAATG ATGAAATAGG GTTAGAGAAT GTAGAAACAA AAGAAGTAGA AAAAGGAATA
AGGATAACAA ATGCAACAAC TAAAGATGGA AAAACAATTA ACGGAGTAGT GGTATTTGGT
CTTGGAAATG TAAGAAAAGT AATGGAGAAA TTAAACGACT GGAATGTAGA TATAGTAGAA
GTTATGGCTT GTGATTATGG ATGTATTGGT GGAGGTGGCC AACCGTATCC AAATGATACA
GAAATAAGGA TAAAACGTGC AAAAATACTT AATGAAGTAG TTGGTATAGA TGTACTAATT
TCACCTACGG AGAATTATCA CATGCTATCT TTATATGAAA ATCACCTTAA AGCTCCTTTG
AGTCACGAAT CTCATAAGCT TTTACATACA ACTTACAAAA ATAGGAAAAG AATAAAAAAT
GGGGATATAG AAATAATTCC TCTACCAGTT GATGAGGATA AAAAAACAGT AGTAAAGGTA
TGTCTTGGAA CATCTTGCTA TGCAAAAGGG TCATACGAGC TTCTTTCACA GCTTATTAAA
CTTACTAATG AAGAAGAACT TTCAAATGTT GAGATAAAAG GAACATTTTG TTTGGAAAAG
TGTGGAAATG CACCAAACGT TATGGTAAAT GATAAAATAA TAGATGAAGC AAGCATTGAA
AAAATAAAAG AGGTGTTAAA GGAGGATGCC AAAAAACGAT AA
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| Protein sequence | MKIIVNGKET IINDNAKNLL EALKEVGIEI PNLCYLSETS IYGACRMCLV EVDNQITTSC
SIKPYEGMNV KTHTPEIYEM RRGILELLLA SHNRDCTTCE RNGNCKLQKY AEEFGIRKVR
FDKIDKPNII DYSSIIIRDN SKCILCGDCV RVCDEIQSIG AIDFAFRGFE AQVMPAFGEE
LANTACVLCG QCVAHCPTGA LTFRNDIQKV YKAMEEEKFV IGMIAPAVRA SIQEELGLDG
DVVTAGRIVN FLKMIGFKKV FDVSFAADLV AYEEAHEFKE RLERGEKLPQ FTSCCPGWVK
FAEHNYPELL DNLSSVKSPQ QALGSVIKRI YAKEMGIDPK DIFLVSIMPC TAKKFEAERE
EFAGEVDVVI TTKELSQIIR SSGFDLKSIP PIPFDRPYGL SSQAGLSFGK TGGVFSSVLK
VLNDEIGLEN VETKEVEKGI RITNATTKDG KTINGVVVFG LGNVRKVMEK LNDWNVDIVE
VMACDYGCIG GGGQPYPNDT EIRIKRAKIL NEVVGIDVLI SPTENYHMLS LYENHLKAPL
SHESHKLLHT TYKNRKRIKN GDIEIIPLPV DEDKKTVVKV CLGTSCYAKG SYELLSQLIK
LTNEEELSNV EIKGTFCLEK CGNAPNVMVN DKIIDEASIE KIKEVLKEDA KKR
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