Gene Tmel_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0479 
Symbol 
ID5297871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp505124 
End bp506356 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content33% 
IMG OID640768740 
ProductPhoH family protein 
Protein accessionYP_001305731 
Protein GI150020377 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA ATTTTGTTTT GGACACAAAT GTATTAATAC ACGATCCAGA ATCTATTTAT 
TCGTTTGAAG ATAATGCCGT AATAATTCCA CTACCCGTTT TGGAAGAACT TGATAATTTA
AAAAGACACA CTGGAAGTCT GGGGAAATAT GCAAGACAAG CTATTAGAGA ATTTGACAAA
TTAAGACAAA AAGGAAAATT ATCTGAAGGT GTAAAACTTG AAAATGGAGG ATTGCTAAAA
GTCATACACT TAAAGAAAAA CGAACATGAA AACATAGACT TTTTATTTGA AAAATACATA
GATAACTGGA TTCTAGTTTA CACACTGCAC ATAATGAAAA ATTCAAAAGA ACCAACATAT
CTAGTTTCAA AAGATATAAA TCTAAGAGTT AAAGCTGATG CATTGGGAAT ACCTGCACAA
GATTATCTTA CCGATAGATC TGAGCTTGCA ACGTTAAATC CCGGATATTT TGAATTTAGA
AATGTAGATA TGGTTGATAA AGAAATGCTT TATCCAAATA TATATATAGA TAGTATAGGA
ACCTATTATA GATTTAACGG AAGGGATTTA CTACAAATAA GTAAAAAGAT AGAAGCTTGG
AATGTTAAAC CAAGAAACAG AGAACAATTT TTTGCTATGG ATGCATTGTT AAACGACGAT
ATAAAACTTG TTTCCTTGAT AGGAATAGCA GGTACGGGAA AAACGTTTAT TACCCTTGCA
TGTGCATTGC AAAAAGCTGT TACAGAACAA AAATATGAAA AGATAGTAAT TGCAAGACCG
CTTGTTGCAA TGGGTGGAAA GGATATAGGG TATTTACCCG GAAGTTATGA AGAAAAGATG
AAACCATGGA TGTCACCTAT ATATGACAAT TTAGAATACC TCTTTAGACT TTCCAATGTA
AATATGAAAG AATTCATGAA AAAAGGTATA ATTGAAATCG AGGCATTGAC ATACATACGT
GGAAGATCTA TCCCCGATCA GTTCATAATA ATTGACGAAG CACAAAATCT AACGCCTCAC
GAAATAAAAA CCGTCTTAAC AAGGGCTGGT GAAAATACTA AGATAGTCCT TTTGGGAGAT
CCATATCAAA TAGATACGCC ATACCTGGAC AAAGATAGTA ACGGACTTGT ATATGCGGCT
AGTAGATTTT TGGAAAGTAA TTTATCAGCA CATATTGTGT TAAAGAAAGG TGAGCGTTCA
ATGCTTGCAA CAGAAGCAGC CAATCTTCTC TAA
 
Protein sequence
MLKNFVLDTN VLIHDPESIY SFEDNAVIIP LPVLEELDNL KRHTGSLGKY ARQAIREFDK 
LRQKGKLSEG VKLENGGLLK VIHLKKNEHE NIDFLFEKYI DNWILVYTLH IMKNSKEPTY
LVSKDINLRV KADALGIPAQ DYLTDRSELA TLNPGYFEFR NVDMVDKEML YPNIYIDSIG
TYYRFNGRDL LQISKKIEAW NVKPRNREQF FAMDALLNDD IKLVSLIGIA GTGKTFITLA
CALQKAVTEQ KYEKIVIARP LVAMGGKDIG YLPGSYEEKM KPWMSPIYDN LEYLFRLSNV
NMKEFMKKGI IEIEALTYIR GRSIPDQFII IDEAQNLTPH EIKTVLTRAG ENTKIVLLGD
PYQIDTPYLD KDSNGLVYAA SRFLESNLSA HIVLKKGERS MLATEAANLL