| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0374 |
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| Symbol | |
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| ID | 5296832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 389868 |
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| End bp | 390755 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768636 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_001305628 |
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| Protein GI | 150020274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.918331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATAG GTAAAGTAGG ACTTGCTCCA ATGGCCGGTA TATCAAATTG GAGTTTTAGA
ACTTTATGTT TTAAATTTGG AGCTGAATTT GCATACACTG AAATGATTAG TGCAGAAAGC
ATAGTACGAA ATTTAAAAAT TAATGAAAAG TACTTTCCGA AGGATATAGA AAAAAAAAGG
GTTGCAGTAC AGATATTTGG TTCAGAGCCA TACATAATGT CACAAGCAGC AAGTATGGTA
GATGGAAAAG GCGCATGGAT AGATATTAAC GCGGGATGCC CTGTGAAAAA GGTGATAAAA
AAAGGTGCAG GCAGTGCTCT TTTGAAAGAC TTAAAAAAAT TAAAAAAGAT AATAGAAGGT
GTTAAAAATA ATGTGAAATC TAAGGTGTCT GTGAAGGTTA GATTGGGGTT TGACGAAGAC
AACTTTGAGA GGATTTACGA TGCTGCAGTA GAAGCTGGTG CCGATATGAT AGCAGTTCAC
GGTAGAACGG CCAAACAGAT GTATTCAGGC CGTGCAAAGT GGCAGATAAA AAATAAAGGC
TATATTCCTT TATATATTAA TGGTGATATC TACAATAGTG ATAATATAAA AATAGCAATG
GAATTATCTG GAGCAGATGG AGTGTTAATA GCCCGTGGTG CAATTGGCAA CCCTTGGATT
TTTTCAAATA TAACTCCTTC TATTTTTGAA AGAAAAAATG TGGTATTACA ACACATCGAT
TTATTATATC TTGAGGTTGG TGATATTCGT GAGTTTAGAA AGTTTGTTGC CGGATATACA
AAAGGGTTAC CAGGAGCAAG GCAGTTTAGA GCAAAAGTGA TGAAGATTGA AGAAATTGAT
GAATTAAAGA TGGCATTTGA AGAATATTTT TTATCTATAT CTAATTAA
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| Protein sequence | MVIGKVGLAP MAGISNWSFR TLCFKFGAEF AYTEMISAES IVRNLKINEK YFPKDIEKKR
VAVQIFGSEP YIMSQAASMV DGKGAWIDIN AGCPVKKVIK KGAGSALLKD LKKLKKIIEG
VKNNVKSKVS VKVRLGFDED NFERIYDAAV EAGADMIAVH GRTAKQMYSG RAKWQIKNKG
YIPLYINGDI YNSDNIKIAM ELSGADGVLI ARGAIGNPWI FSNITPSIFE RKNVVLQHID
LLYLEVGDIR EFRKFVAGYT KGLPGARQFR AKVMKIEEID ELKMAFEEYF LSISN
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