Gene Tmel_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0329 
Symbol 
ID5297114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp335467 
End bp336354 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content32% 
IMG OID640768585 
Productflagellar hook-associated protein 3 
Protein accessionYP_001305584 
Protein GI150020230 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA CTAATGGAAT GATAAATGAA AGAACTCTAT TTAACATACA ACACAGTCTG 
TATAGGATAA GTAAATTACA CGACAAACTT TCTTCAGGAA AAGAAATCTC ATACCCAAGC
GATGATGCAG TGATTGCAAC ACGTGCATCT AACATCTCAA GTAGAATTAG AGAACTAAAA
CAATTCAAAA GAAATGTAGA CCACACTCAA AATTTTGTAA ATATATATGA TTCAACTATA
CAAGAACTAA CGAATGTTTA TCACAGAATA AAGGAATTAA TCGTAAGAGG AGCAAATGGA
GTAAATGACG TTGCAGAACG GGAATCTATT GCACAAGAAC TTGAAAAACT AAAAGAACAC
ATGGAAGATA TAGCAAATAC ACAATTAGGT GGAGAATATA TTTTTGGAGG TGCAAGATCC
GATTTAAAGC CCGTTGAAAA CGGTAAAATT CAAACCCCAC CTGAGGCTGA TATAAAAAGA
AAAATAAATG TACTAGGATT TAAAATAGAA TATGGTGTTA CAGTATACGA TGTATTTAAA
TTGGAAAATG GCAAAGATGC ATTTACAGTT GTGGATGATG CAATTAAAGC ATTAAGAGAA
GGAAACTCTT TAAAACTTTC AAACATTACA CTAAAAGAAG TAAATCAACT TGAAACATCA
ACAATGGAGG TTTTTGCACA AATTGGTGCT AATTCAAGAA CTTTAGAACT TGTAAATTCT
AGGATAACCG ACATAGATAC ATTTATGACA GAATATCTTT CAAAAGAACA AGATGCAGAT
TTAACAAAGG TATTAACTGA TCTTTCCATG CAACAATCTG TCCTACAAGC TGCGTTAAAA
TCCGCAGCTC AAGTACTACA AAAAACGTTG GTTGATTTTG TACAATGA
 
Protein sequence
MRITNGMINE RTLFNIQHSL YRISKLHDKL SSGKEISYPS DDAVIATRAS NISSRIRELK 
QFKRNVDHTQ NFVNIYDSTI QELTNVYHRI KELIVRGANG VNDVAERESI AQELEKLKEH
MEDIANTQLG GEYIFGGARS DLKPVENGKI QTPPEADIKR KINVLGFKIE YGVTVYDVFK
LENGKDAFTV VDDAIKALRE GNSLKLSNIT LKEVNQLETS TMEVFAQIGA NSRTLELVNS
RITDIDTFMT EYLSKEQDAD LTKVLTDLSM QQSVLQAALK SAAQVLQKTL VDFVQ