Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0087 |
Symbol | |
ID | 5297086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 92325 |
End bp | 93446 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640768338 |
Product | chaperone protein DnaJ |
Protein accession | YP_001305349 |
Protein GI | 150019995 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.60044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAAAA AAGATTATTA TGAAATCCTT GGTGTTTCAA GAAATGCCAC ACAAGAGGAA ATTCGACAAG CGTATAAGAA GCTTATAAAA AAATGGCATC CCGACAGAAA TTATGAAAAT AAAAAGCTTG CAGAAGAAAA ATTTAAAGAA ATTCAAGAAG CATATGAAGT ATTATCTGAT CCTGAGAAAA GGGCGATGTA CGATAAATTT GGGTATGTAG GTGATGTTCC ACCAAATGCC GGCGGAGGAT TTAGAGGATT TGGAGGTTTT GAAGATATAT TTAAAGATTT TGGGGATTTT ATTAACAACG ATATTTTTAA TATATTTTTT GGTGATCAAA GGACCTCTTC AAGAAAAAGA ACAAAAACTC CCAGAAAAGG AGAGGATATA AATATCTCCG TTGATGTGTC TTTTGAAGAA TTATTTACTG GGGTAAAAAT TCCACTTGAA TATGATAGAT ACGAAGTTTG TGAGCATTGT CATGGGGAGG GCGTAGAACC TGGAAGTGGA TGGGTAACTT GTCCGAAATG TCATGGTACA GGAACAGTTA GAGAAGAGAG AAGGACATTT TTAGGTGTAA TTGTAAACCA ATATACATGT AATCAATGTG GTGGGACTGG TAAAATTCCT GGAGAGAGTT GTCGTGTATG TGGGGGTACT GGTAGAATAA GAAAAAGACA TAGAATAGAA GTGAATATAC CAGCAGGTGT GGAGAATGGT ACTATTTTGA GAATTCAAGG TGGAGGTCAT GCAGGATATT ATGGTGGAGG ATATGGAGAT TTGTATGTAC ATGTTAGGGT AGTAGGATAC ACAAGTTTTG AAAGAAAAGG CAATAACTTG ATAAAAGATT TAAAGATAGA TTATGTTGAT GCAATTTTGG GAACAAAGGT TAAAATAAAG ATGCCAGATG GTAAAATAAA AGAGGTAAAG ATTCCATCCG GTGTACAACA TGGACAAGAA ATATATGTAT ATGGTGAGGG GATACCTGAT ATGAGAACTG GAAGAAGGGG AGATTTGATT TTAAGGATTA ATGTTGGGAT TCCTACTAAA GTTTCAAGAA CTGAGAAAAA ATTATTAAAA GAAATAGCGA AACTGAGGGG AAAGGATGTT AGAGAAGATT GA
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Protein sequence | MAKKDYYEIL GVSRNATQEE IRQAYKKLIK KWHPDRNYEN KKLAEEKFKE IQEAYEVLSD PEKRAMYDKF GYVGDVPPNA GGGFRGFGGF EDIFKDFGDF INNDIFNIFF GDQRTSSRKR TKTPRKGEDI NISVDVSFEE LFTGVKIPLE YDRYEVCEHC HGEGVEPGSG WVTCPKCHGT GTVREERRTF LGVIVNQYTC NQCGGTGKIP GESCRVCGGT GRIRKRHRIE VNIPAGVENG TILRIQGGGH AGYYGGGYGD LYVHVRVVGY TSFERKGNNL IKDLKIDYVD AILGTKVKIK MPDGKIKEVK IPSGVQHGQE IYVYGEGIPD MRTGRRGDLI LRINVGIPTK VSRTEKKLLK EIAKLRGKDV RED
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