| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3127 |
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| Symbol | |
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| ID | 7317357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3277727 |
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| End bp | 3278728 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643618026 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002515183 |
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| Protein GI | 220936284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.970335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTGA AGCATAACAA TGCCCTGATT GCCGGTACCG CGGTCCTGGC CCTCGCCGCG
CCCATGGCCG CCAACGCCGA TGACATCAAC TTCGACTTCT ACGGTTCTGC CCGGGTACAC
GCGGAATCCG TACAGCCCGA CGACACCTCG GCGCTGGATT CCTACACTGG CGTGCGCGAC
GCCTACTCCC GGATCGGCTT CAACGCCGAC TACGCGCTGA GCGAGAACGT GGAACTGTTC
GGTCAGCTGG AACTGCCCCT GGACCTGGCC AACAAGGCGG TACAGGACCC CTGGGATCAG
GACCTGGACA TCCGTGTCGG CCAGATCGGT CTGCGCGGTG ATTTCGGCAC CTTCGCCTAC
GGGCAGATGT GGATGCCCTA CTACAACGCC ATCGCCTACC CGGTGGATAT GTTCAGCACG
TACTACAGCG GCTTTGCCAC CTTCACCAGC TTCCGCCTGG GCGATACCAT CGCCTACTAC
AGCCCGAGCT TCGGCGGCTT CTCGGTAGCC GCTGCCTGGA GCGACAGCAA TGGCGCCGAC
GGTGATGACC GCTACCAGCT CACCGCCAGC TACAGCTTCG GCGACACCAC CCTCGCCGCG
GGCCTCGACG ATTGGGGGGG AGATTCCAAT TCACGCATCT GGGGTGTATC TCTCATGCAC
ACCATCGGCG ACCTCTACAT CGGCGCCAAG TACGAGGTCC ATGACAGCGA CATCGACAGC
GGCTACGGTG CAGATGGCGA CAGCGCCGTG AACCTCTACG CCGGTTACAC CCTGGGCAAG
AACACCTTCA AGCTCATGCT GGCCAACGTG GACAACTACG GCGAGGGCAT CGTGCATCTG
GGGGTGGACC ACCAGCTCAA CGACCAGCTG AAATTATTCG CTGAGTACTA CTACGAGGAA
GAGACCGCCG CCATCACCGA AAAGCGCGGT GGCCTCAATG AAACCGCCTG GGCCGCCAGC
GGCGGACAGG TGCTTGCCGC GGGCGTGCGC TACGACTTCT GA
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| Protein sequence | MPVKHNNALI AGTAVLALAA PMAANADDIN FDFYGSARVH AESVQPDDTS ALDSYTGVRD
AYSRIGFNAD YALSENVELF GQLELPLDLA NKAVQDPWDQ DLDIRVGQIG LRGDFGTFAY
GQMWMPYYNA IAYPVDMFST YYSGFATFTS FRLGDTIAYY SPSFGGFSVA AAWSDSNGAD
GDDRYQLTAS YSFGDTTLAA GLDDWGGDSN SRIWGVSLMH TIGDLYIGAK YEVHDSDIDS
GYGADGDSAV NLYAGYTLGK NTFKLMLANV DNYGEGIVHL GVDHQLNDQL KLFAEYYYEE
ETAAITEKRG GLNETAWAAS GGQVLAAGVR YDF
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