| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3089 |
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| Symbol | |
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| ID | 7316019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3234411 |
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| End bp | 3238025 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643617988 |
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| Product | urea carboxylase |
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| Protein accession | YP_002515145 |
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| Protein GI | 220936246 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.176139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACA AGGTCCTGAT CGCCAACCGC GGCGCCATCG CCTGCCGCAT CATCCGCACG
CTCAAGTCCA TGGGCGCGGG CTCGGTCGCG GTGTACTCGC AGGCCGACGC CCACTCCCTG
CACGTGAGCC AGGCGGACGA GGCGGTGTGC ATCGGCCCTG CACCGGCCCG GGACAGCTAC
CTGGACTGGA ACAAGATCCT GGAGGTGGCC CGCAGCACCG GCGCCGAGGC CATCCACCCC
GGCTACGGCT TCCTGAGCGA GAACGCCGCC TTCGCCGAGG CATGCGAGCA GGCGGGCATC
GCCTTCATCG GCCCGACGCC GCAGCAGATG CGCGACTTCG GCCTCAAACA CACGGCCCGG
TCCCTGGCCG CCGAGAACGG CGTGCCCCTG CTGCCCGGCA CCGGCCTGCT GGACGACCTG
GACCACGCCC GGCGCGAGGC CCTGCGCATC GGCTACCCGG TGATGCTCAA GAGCACCGCC
GGCGGCGGCG GCATCGGCAT GCAGATCTGC CGCTCGGAGA AGCAATTGGA GGAGGCCTTC
CACTCGGTGG AACGCCTGAG CCGCAACAAC TTCGGCCAGG GCGGCATCTT CCTGGAGAAG
TACGTGGAGT ACGCCCGGCA CCTGGAGGTG CAGATCTTCG GCGACGGCGA GGGCCGCGTG
GTGGCCCTGG GCGAACGGGA CTGCTCGGTG CAGCGGCGCA ACCAGAAGGT GATCGAGGAG
ACCCCGGCGC CGGGCATCGA CGACGGCCTG CGCGCGCAGC TCATGGACGC GGCGGTGCGC
CTGGGCCAGG CGGTGAACTA CCGTTCCGCC GGCACCGTGG AATACGTCTA CGATACCCGG
ACCGGCGCCT TCTACTTCCT GGAGGTGAAC ACCCGGCTGC AGGTGGAACA CGGGGTCACC
GAGGAGGTGA CCGGCGTGGA CCTGGTGGCC TGGATGGTGC GCCTGGCCGC CGGCGAGCGC
GACTTCCTGG GCGCCTACCG GCACGCCCCC CGGGGCGCCG CCATCCAGGC GCGCCTCTAC
GCCGAGGACC CGGGCAAGCA GTTCCAGCCC TCCAGCGGCG TGCTCACCGC ACTGCGCCTG
CCTTCGGACA TTCGCGTCGA GACCTGGGTG GAACAGGGTT CCGAGATCTC GCCCCACTAC
GACCCCATGA TCGCCAAGCT CATCGCCCGG GGCGCGGACC GGGACGAGGC CCGGGCCCGG
CTCGGCGAGG CGATCGCGTG CGCCGAGCTG CACGGCATCG AGTCCAACCT GCCCTACCTG
GGCCAGATCC TCGCCGACGA CGTGTTCCGG CAGGCGCAGC ACTACACCCG CTACCTGGAT
CGCCTCGCCT ACCGCCCCGC CACCCTCGAG GTGCTCTCCC CCGGCACCCA GTCCATGGTG
CAGGACTACC CCGGGCGCAC CGGCTACTGG CCCATCGGTG TGCCGCCCTC GGGCCCCATG
GACCATCTCG CCTTCCGCCT GGCCAACCGG GCGGTGGGCA ACCCGGAAGG CGCGGCGGCC
CTGGAACTGA CCGTCACCGG CCCGACCCTG CGCTTCAACA CGGACACGGT GATTGCGCTC
ACCGGCGCCT GGATGAAGGC CCTGCTGGAC GGCCAGGAGA TCCCCTACTG GCAGCCGGTG
CCGGTGCGCG CCGGCAGCAC CCTCAGGCTG CGCGCCATCA GCGGCGCCGG CAGCCGCAGC
TACCTGGCGG TCAAGGGTGG TCTGGACGTG CCCGACTACA TGGGCAGCAA GTCCACCTTC
ACCCTGGGCC AGTTCGGCGG CCACGGCGGG CGCACCCTGC GGACGGGCGA CGTGCTGCGA
CTCAACGCCG CCAGCGCACC GGACGAGACC TGCCGGGAGA TCCCGGCGGC CCTGATCCCG
GCCTACGGCA GACACTGGGT CATTCAGGTC ACCTACGGCC CCCACGGCGC GCCGGACTTC
TTCACCGACG CGGACATGGC GACCTTCTTC GCCACCGACT GGGAGGTGCA CTACAACTCC
AGCCGAACCG GGGTGCGTCT GATCGGCCCG AAGCCCCGGT GGGCCCGGGA GGACGGCGGC
GAGGCGGGCC TGCACCCCTC CAACATCCAC GACAACGCCT ACGCCATCGG CGCGGTGGAC
TTCACCGGCG ACATGCCGGT GATCCTGGGT CCCGACGGAC CGAGCCTGGG CGGCTTCGTG
TGCCCCGTGA CCATCATCCA GGCGGAACTG TGGAAGCTGG GCCAGCTCAC CCCCGGCGAC
ACCCTGCGCT TCCACTGCAC CGACATCGCC AGCGCCAACG CCCTGGAGGC GCACCAGGAC
CGCTGCATCG CCACCCTGTC CCCCGCCCCC GCCCCCGCCA TCCAGGCCCG GGTGCCGGGC
GTGGACACCA GTCCCGTCCT GTACCGGCGT GAGGCAGACG CGGATCACGT GGGCGTCTGC
TATCGCCAGG CCGGCGACCG TTACCTGCTG ATCGAGTACG GCCCCCTGGT GCTGGATCTC
AGGCTGCGTT TCCGGGTGCA CGCCCTGATG GACTGGATCG AACGCCAGGC CATCGAGGGC
ATCATCGAGA CCACCCCGGG CATCCGCTCC CTGCAGGTGC ACTACGACAG CCGGGTGATC
GGCCAGGCGG ACCTGGTGCG GCTGCTCAAG CAGGCCGAGG ACGCCCTGCC CGCCATCGAG
GACATGCAGG TGCCGAGCCG CATCGTGCAC CTGCCCCTGT CCTGGGACGA CCCCTCCACC
CGGCTCGCCA TCGAGAAGTA CATGCAGTCG GTGCGCCCCG ACGCCCCCTG GTGTCCCAGC
AACATCGAGT TCATCCGCCG CATCAACGGC CTGGAAGACA TCGATCAGGT GAAGGACATC
CTGTTCAACG CCCGCTACCT GGTCATGGGC CTGGGCGACG TCTACCTGGG CGCGCCGGTG
GCCACGCCGC TGGACCCGCG CCACCGCCTG GTGACCACCA AGTACAACCC GGCGCGCACC
TGGACGCCGG AGAACGCCGT GGGCATCGGC GGCGCGTACC TGTGCGTCTA CGGCATGGAA
GGGCCGGGCG GCTACCAGTT CGTGGGCCGC ACGGTGCAGA TGTGGAACCG CTACCGGCAG
ACCCGGGACT TCACCGAGGG CAAGCAGTGG CTGCTGCGCT TCTTCGACCA GCTGCGCTTC
TACCCGGTGA GCCACGAGGA ACTGCTGCGC ATGCGCGAGG ACTTCGTGCA CGGCCGCTTC
AACCTGCGCA TCGAGGAGAC CACCTTGAGG CTCGGCGACT ACCTGCGCTT CCTGGAGGAA
AACGCCGAAT CCATCGCCGC CTTCAAGGCC CGCCAGCAGG CCGCCTTCGA GGCGGAGCGG
GAGCGCTGGA AGCAGGCCGG CCAGGCAGAG CACGTGGATG CGCTGCCGGA CGATGAATCC
ACCTCCGACG CGCCCTTCGA CCTGCCCGAG GGCTGCCTGG CGGTGGCCTC GCCGGTCACC
GGCAGCGTCT GGGAGATCGC GGTCAAGCCC GGCGACCGGG TCGCCCCCGG CGACACCTTG
GTGGTGGTGG AGGCCATGAA GATGGAGATC CCCATCGAGG CGGACGAGGA GGCCGTGGTG
CGCGAGGTGC TCTGCGCCCG GGGCGGCTCG GTGCATGCCG GCCAGGCGGT GATCATCCTG
GAACTCCAGT CCTGA
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| Protein sequence | MFNKVLIANR GAIACRIIRT LKSMGAGSVA VYSQADAHSL HVSQADEAVC IGPAPARDSY
LDWNKILEVA RSTGAEAIHP GYGFLSENAA FAEACEQAGI AFIGPTPQQM RDFGLKHTAR
SLAAENGVPL LPGTGLLDDL DHARREALRI GYPVMLKSTA GGGGIGMQIC RSEKQLEEAF
HSVERLSRNN FGQGGIFLEK YVEYARHLEV QIFGDGEGRV VALGERDCSV QRRNQKVIEE
TPAPGIDDGL RAQLMDAAVR LGQAVNYRSA GTVEYVYDTR TGAFYFLEVN TRLQVEHGVT
EEVTGVDLVA WMVRLAAGER DFLGAYRHAP RGAAIQARLY AEDPGKQFQP SSGVLTALRL
PSDIRVETWV EQGSEISPHY DPMIAKLIAR GADRDEARAR LGEAIACAEL HGIESNLPYL
GQILADDVFR QAQHYTRYLD RLAYRPATLE VLSPGTQSMV QDYPGRTGYW PIGVPPSGPM
DHLAFRLANR AVGNPEGAAA LELTVTGPTL RFNTDTVIAL TGAWMKALLD GQEIPYWQPV
PVRAGSTLRL RAISGAGSRS YLAVKGGLDV PDYMGSKSTF TLGQFGGHGG RTLRTGDVLR
LNAASAPDET CREIPAALIP AYGRHWVIQV TYGPHGAPDF FTDADMATFF ATDWEVHYNS
SRTGVRLIGP KPRWAREDGG EAGLHPSNIH DNAYAIGAVD FTGDMPVILG PDGPSLGGFV
CPVTIIQAEL WKLGQLTPGD TLRFHCTDIA SANALEAHQD RCIATLSPAP APAIQARVPG
VDTSPVLYRR EADADHVGVC YRQAGDRYLL IEYGPLVLDL RLRFRVHALM DWIERQAIEG
IIETTPGIRS LQVHYDSRVI GQADLVRLLK QAEDALPAIE DMQVPSRIVH LPLSWDDPST
RLAIEKYMQS VRPDAPWCPS NIEFIRRING LEDIDQVKDI LFNARYLVMG LGDVYLGAPV
ATPLDPRHRL VTTKYNPART WTPENAVGIG GAYLCVYGME GPGGYQFVGR TVQMWNRYRQ
TRDFTEGKQW LLRFFDQLRF YPVSHEELLR MREDFVHGRF NLRIEETTLR LGDYLRFLEE
NAESIAAFKA RQQAAFEAER ERWKQAGQAE HVDALPDDES TSDAPFDLPE GCLAVASPVT
GSVWEIAVKP GDRVAPGDTL VVVEAMKMEI PIEADEEAVV REVLCARGGS VHAGQAVIIL
ELQS
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