Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2035 |
Symbol | |
ID | 7316424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 2163363 |
End bp | 2164712 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643616927 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_002514102 |
Protein GI | 220935203 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0275418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA CCAAGATCAT CGCCCTGGAC GACGACCCCA CCGGTTCTCA GACGGTGCAC AGCTGCCTGC TGCTGACCCG CTGGGACGTG GCCACCCTGC GCCAGGCGCT GCGGGACGCC TCGCCCATCT TCTTCGTGCT GACCAACACC CGGGGCATGG ACGCCCATCG GGCGGCACAG ATCACCCGCG AGGTCTGCGC CAATCTCAGG CAGGCACTGG CCGAGGAGGC CGCCGCCGGA CACCCGGTCA ACCCGGTGAT GGTGAGCCGC TCCGATTCCA CCCTGCGGGG TCACTACCCG GTGGAGACCG ACGTGATCGC CGAGGCCATG GGCCCGTTCG ATGCCCACTT CCTGGTGCCC GCATTCATCG AGGCCGGACG CATCACCCGG GACTCGGTGC ACTACGTGGT CCAGGCCGGC AAGCCCGTCC CTGCCCACGA GACGGAATTC GCCCGGGACT CGGTGTTCGC CTATCGCCAC AGCTACCTGC CCGACTACGT GGCGGAGAAG ACCCGCGGAC GCATCCCCGC CGAGACCGTG CAGCGTTTCA CCCTCGCCGA CCTGCGCGGC GACGTGACCG ACCGGCTCAT GGCCCTGGAA GGCAACGCCT GCGCCGCGGT GGACGCGCAG ACCCAGGCGG ATCTCGAGCG CTTCGCCGAT GCCGTGCTGA CGGCGGCGGC ACGAGGCAAA CGCTTCCTGT TCCGCAGCGC CGCCAGCCTG CTCACCGCCC TGGCCAGGCT GCCCGCCCAG CCCGTGCCCG CCGAGGCCAT GTCCCGCTAC GTGCGTGGCG GCCGCCCTGG CGCGGTCATC GTCGGCTCCC ATGTGAAAAA GACCACCCAG CAGCTGCACC GCCTGCTGGA GACACCGGGC ACGGCGGGCG TGGAGATCGA CGTCAACCGG CTGCCCGGGG AACGGGACGC CGTGCTGCGC GAGACCCTGG CGGCCATCCA GGCGATCCAC GAGCGGGGCG ACACCCCCGT GGTCTACACC AGCCGCGCCG AGCGCCAGTT CCCGGACCAG CAGACCCGGC TTGCCTTCGG CGAACAGGTC TCGGCCCTGC TCATGGACGT GGTGCGCGGC CTGCCCGCGG ACATCGGCTA CCTGATCAGC AAGGGCGGCA TCACCTCCAA CGACACCCTG AGCACCGGGC TGGCCCTGGC CACCTCGCGG GTGCTGGGCC AGATCCTCAC CGGCTGCTCC GTGGTGCGCT GCCCCGACGA CCATCCCCGC TTCCCGGGCC TGCCGGTGGT GATCTTCCCG GGCAACGTGG GCGACGAACA CGCCCTGGCC GAGGCCTACC GTAGACTCGC CCTGCCGGGC GACGGTCACC GGCATCAAGC GGCCGGCTGA
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Protein sequence | MSDTKIIALD DDPTGSQTVH SCLLLTRWDV ATLRQALRDA SPIFFVLTNT RGMDAHRAAQ ITREVCANLR QALAEEAAAG HPVNPVMVSR SDSTLRGHYP VETDVIAEAM GPFDAHFLVP AFIEAGRITR DSVHYVVQAG KPVPAHETEF ARDSVFAYRH SYLPDYVAEK TRGRIPAETV QRFTLADLRG DVTDRLMALE GNACAAVDAQ TQADLERFAD AVLTAAARGK RFLFRSAASL LTALARLPAQ PVPAEAMSRY VRGGRPGAVI VGSHVKKTTQ QLHRLLETPG TAGVEIDVNR LPGERDAVLR ETLAAIQAIH ERGDTPVVYT SRAERQFPDQ QTRLAFGEQV SALLMDVVRG LPADIGYLIS KGGITSNDTL STGLALATSR VLGQILTGCS VVRCPDDHPR FPGLPVVIFP GNVGDEHALA EAYRRLALPG DGHRHQAAG
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