Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1569 |
Symbol | |
ID | 7316193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1684602 |
End bp | 1685849 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643616460 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_002513640 |
Protein GI | 220934741 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCT CCCCCCTTGT CCGCCGCATC CTGCCCCTGC TCATCCTGGC GGCAGGCGTG ATCGGCTTTC TGATCCTGCG TGCCACGGCG CCCGAGAGCC CGCCCATGGC GGTGGGCGAG CGGGTCTGGC GGGTCAACAC CGAGACGGTC ACGCCCGCCA CCCTGGCGCC CAGCCTGAGC CTCTACGGCC ACGTGACCAC GCCCCGCACC GCTAACCTGC GCGCCGCGGT GGAGGCGGAC GTGCTGGAGA CGCCCGGCGA GGAAGGTCGC AGGGTCGAGG CCGGCCAGGT GCTGGTGCGC CTGGACGATC GGGAGATCGG CCTGCTGGTG ACCCAGCGGG AGGCGGACGT GGCGGACATC CGCGCCCAGA TCAGTGCCGA GCGCCTGCGC AACGCCCGGG ACCGGGAGGC GCTCAAGCAC GACGAGGCCC TGCTGGAGAT CGCCTGGCGC AACGTGGAAC GGGCCCAGGA CCTGTTCGCC CGCAAGCTGG GCAGCCAGAG CGCCCTGGAC GAGGCGCGGC GTGCCCACGA GCAGCAGGCG CTCGCGGTCA ACGCCAGGCG CCTGGCGCTG GAGGATTTCC AGGCCCGGCT GGCCCAGCTG GAGGCCCGTG CCCGGCGCGC CGAGGCGCTG CTGGAGGATG CGCGCCTGGA CCTGGAACGC ACCCGCGTGC GCGCACCCTT CGCCGGCCGC GTGTCCCGAC TGGCCGTCGC CCCCGGTGAC CGGGTGCGCA TCGGCGATCC GCTGGCGACC CTGTTCGATG CCGATGCCCT GGAGGTTCGC GCCCGCATCC CCGCCCTGTA TCTGCCGGTG GTGCGCCGCG GCCTGGATGC CGGTGAGCCC CTGTCGGCCC GGGGCGAGAT CGACGGCGAA CACGTGGTGC TGGAACTGAG CCGCCTGGCC GGCGAGGCGC CTGCCACCGG TGCCGGCGTG GAAGGCCTGT TCCGCATCAC GGAGGGCGGC GAACACGCAC CGCTGGGGCG TTTCCTGACC GTGCATCTGC GTCTGCCGGA AGCGGCAGAT GTGGTCGCCC TGCCCTTCGA GGCCCTGTAC GGCATCGACC GGGTCTACCG GATCGAGGAA GGCCGCATGC GCGCCATCAC CGTCGAGCGG CGCGGCGAGT GGCTCGATGA CAACGGTCGA GAACGGGTGC TGGTGTACAG CCCGGAGATC CGTGACGGCG ACCGGCTGGT GACCACCCGT CTGCCCAATG CATTGGACGG CCTGCGGGTC GAGACGGACT GGGACTGA
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Protein sequence | MSLSPLVRRI LPLLILAAGV IGFLILRATA PESPPMAVGE RVWRVNTETV TPATLAPSLS LYGHVTTPRT ANLRAAVEAD VLETPGEEGR RVEAGQVLVR LDDREIGLLV TQREADVADI RAQISAERLR NARDREALKH DEALLEIAWR NVERAQDLFA RKLGSQSALD EARRAHEQQA LAVNARRLAL EDFQARLAQL EARARRAEAL LEDARLDLER TRVRAPFAGR VSRLAVAPGD RVRIGDPLAT LFDADALEVR ARIPALYLPV VRRGLDAGEP LSARGEIDGE HVVLELSRLA GEAPATGAGV EGLFRITEGG EHAPLGRFLT VHLRLPEAAD VVALPFEALY GIDRVYRIEE GRMRAITVER RGEWLDDNGR ERVLVYSPEI RDGDRLVTTR LPNALDGLRV ETDWD
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