Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0900 |
Symbol | |
ID | 7315924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 971336 |
End bp | 972205 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643615780 |
Product | HflC protein |
Protein accession | YP_002512978 |
Protein GI | 220934079 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.219855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCA TCATTGGAAT CGTGGCGGTG GTGTCCGCCA TCATCGTGGG CATGTCCACC TACACCGTGG ACGAGCGTGA GCGCGTGATC CTGTTCAGCC TGGGTGAGAT CAAGGCCCTG GACCTTGAGC CGGGCCTGCA CTTCAAGTTC CCCCTGGTGA ACAACGTGCG CAAGTTCGAT TCCCGGGTAC TGACCCTGGA CATCCCGCCG GACCGCTTCC TTACCAGCGA GGCGAAGAAC GTCATCGTCG ACTTCTACGC CAAGTGGCGT ATCGACGACG TGGGCCAGTT CTTCCGCTCC ACCCGCGGCA ACGAGCGCAA CGCCGAGGAC CGCCTGGCGC AGATCCTGCG CGACGGCATG CGTAACGAGT TCGCCCGCTA CACCCTGGAA CAGGTGGTCT CCGGCGAGCG TCTCACCATC ATGGGTGCCG TGCGTCAGCA GGCCCTGGAC ACTGCCCGGG AGCTGGGCGT GGTGCTGGTG GACGTGCGCA TCCGTCGCAT GGACCTGCCC GACGAGGTGA GTGAGTCCGT GTACGAGCGT ATGCGTGCCG AGCGTCAGCG CGTGGCCCAG GACTTCCGTG CCCGGGGCCG CGAGGAGGCC GAGCGTATCC GCGCGCGTGC CGACCGCGAG CGCACCGTGA TCCTGGCGGA TGCCTACCGG GAGTCCGAGC AACTGCGTGG TGAGGGCGAT GCCCGCGCCG CCGAGACCTA TGCTCGGGCC TTTGGCGAGG ACGAGGAGTT CTTCTCCTTC TACCGGAGCC TGATCGCCTA TCGCAGCACC ATGACCGGCG ACAACACCAT GTTCGTCATC GAGCCGGATT CGGACTTCTT CCGCTACTTC GGCAGCCCCA TCGGGGCGCC CCGACGGTAG
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Protein sequence | MIRIIGIVAV VSAIIVGMST YTVDERERVI LFSLGEIKAL DLEPGLHFKF PLVNNVRKFD SRVLTLDIPP DRFLTSEAKN VIVDFYAKWR IDDVGQFFRS TRGNERNAED RLAQILRDGM RNEFARYTLE QVVSGERLTI MGAVRQQALD TARELGVVLV DVRIRRMDLP DEVSESVYER MRAERQRVAQ DFRARGREEA ERIRARADRE RTVILADAYR ESEQLRGEGD ARAAETYARA FGEDEEFFSF YRSLIAYRST MTGDNTMFVI EPDSDFFRYF GSPIGAPRR
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