Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0865 |
Symbol | |
ID | 7315888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 929749 |
End bp | 931851 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643615744 |
Product | TonB-dependent receptor |
Protein accession | YP_002512943 |
Protein GI | 220934044 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0848071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCGA GTACCTGTCC GTCGAGACGC CCGGATCCGG GCGCCCTGTT TTCACTGCGC AGCCTGCCCT GCGCCGTCGC AGCTGCCCTG GGCACGCTGG TGCTACTGCC CGCAACCACC ATGGCGGAAG GCCAGCTGCT GCCCAGGATC GAGGTGGTCG GCTCGGCAGA GGAGGACAAA GCCCGCCAGC CGGGTGCCGT GGTCGTGGTC ACCGAGGAGG ACCTGGAACT CTGGCAACCG CTATCCACCG AGGATGCACT GCGGCACGTG CCCGGTGTTC ATATCAAGCG GGAGGAGGAG TCCGCGGTGG TCGCCAACAT CGGCATCCGC GGCCTGAGCG CGTCGGATTA CAAGACGCTG ATTCTCGAGG ATGGTGTGCC GGTGGCTCCC GGTCTGTTCG TTGGCAACGG GCGCTACTTT AACCCGCGCA TCCAGCGCAT GGAGGGGGTC GAGGTGCTCA AGGGGCCTGC GGCAGTGCGT TACGGTCCGA ATACCGTCGG TGGCGTGATC AATTACCTGA CCAAGACGCC CGAGGACGGC GTGGTGGTCA GCGGTCGTGT CGGTTCGCAC AACCTGCGTG AATCCACCGT GGAACTCGGC GGCAGCGCAC CCTCGGGTGA CGCGATCATC GGCGCCGTGG TCACGTGGGC CGAAAGCGAT GGCTTCATGG ACAAGGGTTA CAGGATGTCC GATGTCATGG TCAAGGGCGG CATGGCCGTC GGCGAGGATC AGTGGATCGG CGTCAAGTTC AGCCATTACA ACAACGACGC CAACATCTCC TACCGGGGCC TGTTTCCTGA TGCCTATGAG GCGGGGGCGA AGTTCAACCC GGCCCCCGAT GACTACTTCC TGACGGAACG CCAGGCCTTC GACGTCAACC ACGAATGGCA GATCAGCGAT GCCGCACGCC TGAACACGGT CCTCTACTGG AGCCAGATGT ATCGCGATTA CTGGCGCTTC GACCTGGTGG GCGGCAGTCC CACCACGGTG ATCGATGGTC TGACCCAGTG GAACTACAGC GATTCGGTGA CCGGCAACAA CCGTGCATTC GAACGGGTGG GCATGGACTC CCGTCTGCGA GTGGATCATG GAGGCTTCGG CATGCGCAAT GAAGCGGAGA TTGGTCTGCG TTACATGGAC GAGAGCATGA TCGATACGAG GGTGAGGGCC ACCCGTGAGC AGCCCCGGCA CGGGCTTGTC GACCGCAATG AAAAACAGAC GGCCCAGAGT CTGGCCGTGT TTGCCGAGAA CCGCTTCTTT GTCAACGACC GTCTGGCCAT CACGCCGGGT CTGCGGGTCG AGACCTATGA GCAGCGTCGC GATGACCGGG TGAATAACGC CAATGACGGC AAGTCCAGCA ATACCGAGTT GCTGCCCGGA GTCGGCGCCA CGTTTCAGTT GAATCCCCAG GTCCAGTTCT ATGGCGGCAT CTACAGGGCG TTTGCGCCGC CGCTCAATAA CCAGTCGATC GTCACGGGCG TGGACCAGAA GCTGGATGCC GAGCGGTCGA CCAACGTGGA AGTGGGTGTG CGAGGACGTC AGGGCAATCT GCGGTATGAG ATGACCGCCT TCCAGATGGA TTTCAGCAAT CAGGTCACCC CGGCGGTCAG TGGTGATCTG GCGAATGCCA ACGCCGGCAG CACCCTGCAC CGGGGGCTGG AGTTCATGCT GGGCTATGAC TGGGCCAACG GGGTGTTCGT GGATGCCAAC CTGACCTACA TCCCAACCTC GGAATACCGC GAGGACAGGG GCAACGGCAT CGACAAGGGT AATCGGCTCC CGTACTCCCC CGAACTGGTT GCCAATCTCA GCGTGGGCTA CATCTCCGGC CCGCTCAAGA CGGCCCTGTC CGGTAACTAT GTGAGCGAGC AGTACGGAGA TGGACAGAAC TCGGTCGACT TCGTGCAGAC CGGAGTCTGG GGTGGCCGCA TGCCGAGTTA CTACACCTTC GACCTGACCG GCATGTACGA CGTGAACGCC CGTCTCAGCG TCTTCGGTGC CGTGAAGAAC CTCACCGATG AACGCTACAT CGGTGGACTG CGCCAGGGTA TCTACGTCGG TCCCGAACGG AGCTTCGAGG CCGGGGCCCG CTATCGGTTC TAG
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Protein sequence | MSASTCPSRR PDPGALFSLR SLPCAVAAAL GTLVLLPATT MAEGQLLPRI EVVGSAEEDK ARQPGAVVVV TEEDLELWQP LSTEDALRHV PGVHIKREEE SAVVANIGIR GLSASDYKTL ILEDGVPVAP GLFVGNGRYF NPRIQRMEGV EVLKGPAAVR YGPNTVGGVI NYLTKTPEDG VVVSGRVGSH NLRESTVELG GSAPSGDAII GAVVTWAESD GFMDKGYRMS DVMVKGGMAV GEDQWIGVKF SHYNNDANIS YRGLFPDAYE AGAKFNPAPD DYFLTERQAF DVNHEWQISD AARLNTVLYW SQMYRDYWRF DLVGGSPTTV IDGLTQWNYS DSVTGNNRAF ERVGMDSRLR VDHGGFGMRN EAEIGLRYMD ESMIDTRVRA TREQPRHGLV DRNEKQTAQS LAVFAENRFF VNDRLAITPG LRVETYEQRR DDRVNNANDG KSSNTELLPG VGATFQLNPQ VQFYGGIYRA FAPPLNNQSI VTGVDQKLDA ERSTNVEVGV RGRQGNLRYE MTAFQMDFSN QVTPAVSGDL ANANAGSTLH RGLEFMLGYD WANGVFVDAN LTYIPTSEYR EDRGNGIDKG NRLPYSPELV ANLSVGYISG PLKTALSGNY VSEQYGDGQN SVDFVQTGVW GGRMPSYYTF DLTGMYDVNA RLSVFGAVKN LTDERYIGGL RQGIYVGPER SFEAGARYRF
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