| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0318 |
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| Symbol | |
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| ID | 7316294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 360099 |
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| End bp | 360914 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643615202 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002512403 |
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| Protein GI | 220933504 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.844809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA ACCGGGAGTT GCCACCCATG TCCAGCCCAT CCAAAACTCG GCGCCTCGCC
GCCCTGCTGT CCGCCCTGGC CCTGTCGCTG ACCCTGGCCG CGCCCGTGGC GCTGGCCGAG
GAGATACCCG CCCGCCTGGA CTGGGCCGAG CGCCTGGAGT TGGGCACGCC GGTCTCCGGC
ATGGTCACCC GGGTCAACGC CGAGCCGGGG CAGCGGGTCA AGCGCGGCGA CGTGCTGGTG
CAGCTGGACG ATCGCGGCCT GCGCGCCTCC GTGGAGGAGG CCGAGGCCCA GGTCAAGCGC
CTGGAGCTGG CCCGCGACGA GGCGAAGCTC GAATACGAGC GCCAGCAGGA GATGTTCGAC
CGCACCCTCA TCTCCCAGCG CGACCTGAGC CTGGCGCAGA TCGGTTTCGC CATGGCGGAT
GCAGAGTTCG TGGCCGCCAA GGCGCGGCTC ACCCGCGCGC GCCTGGACCT GGAATACAGC
CGCGTGCGCG CCCCCTTCGA CGGCCTGGTG CTCGCCCGCC ACGTGCGCGT CGGGCAGGCG
GTGAACAACG AACTGCAGGT CACGCCGCTG GTTACCCTGG TGAGCAGCGA GCCCATGCTC
GCCCGCGGCA GCGTCGCCGA GGCACGCCTG GCGCGCCTGC GCGAGGGGCA GAACGTGGCG
GTGCAGGTGG GCGATCAGCG TTACGAAGGG CGCCTGCGTG CCCTGGGACT GGAGCCCACC
GAGGCAGGCT TCCCGGTGAC GGTGCAGTTC AGCGCCCCGA CCGAGCACGG CCTGCGCGCC
GGCCTCGCGG CCACCCTGCA GACCGGCAAT GACTGA
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| Protein sequence | MNQNRELPPM SSPSKTRRLA ALLSALALSL TLAAPVALAE EIPARLDWAE RLELGTPVSG
MVTRVNAEPG QRVKRGDVLV QLDDRGLRAS VEEAEAQVKR LELARDEAKL EYERQQEMFD
RTLISQRDLS LAQIGFAMAD AEFVAAKARL TRARLDLEYS RVRAPFDGLV LARHVRVGQA
VNNELQVTPL VTLVSSEPML ARGSVAEARL ARLREGQNVA VQVGDQRYEG RLRALGLEPT
EAGFPVTVQF SAPTEHGLRA GLAATLQTGN D
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