Gene Tgr7_0238 details

Gene Information

• Locus tag: Tgr7_0238
• ID: 7316816
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 255540
• End bp: 256325
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643615123
• Product: type II secretion system protein N
• Protein accession: YP_002512324
• Protein GI: 220933425

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAACCG AACACACCCA CAAGCGCCGC TGGCTGCTCT GGCTCATCAT CGGGCTGCTG 
GCCTACGGCT TGTTTCTGCT GACCCTGCTG CCGGCGGGAC TCGCCTGGGA TCAGGCTCGT 
GCAAGGGGCA TGGTGCCCGC GGGCGTGGAA GTGCAGGGCA TCACGGGCAC CCTGTGGAAC 
GGCGCGGCCG TGCGCGCCGT GCTGCCCGGT GGACTGCAGG TAAACGACCT GCAGTGGCGC 
GCCACCTTCA CCAGCCTGCT GGCCATGCGC CTGGGCTGGG ACCTGGAGGC CCGGCCCCAG 
GGCGGTCGCG TCGCGGCCCA CGTGGCCGTG GGGCCCGGCA CGGTGGTGCT GGCCGGGGTG 
CGCGGCGACA TGCCGGCCGC GCCGGTGGTG GCGCCCTTCA TGACCTGGCC GGTGCGGGTG 
AACGGCCGGC TGGTGCTGGA TCTGGAGCGC CTGCAGCTGG CCTACAGCGG TCAGGTGCGT 
GAGGCCCGCG GCGTGCTGGG CTGGATCGAT GCCGCGGCCG GCATCCCCGA GCCGCTGCCC 
CTGGGCGATC TGCGCGCCGA GATCTCTGAT ACCGGCGAGG GCGGTCTGCG CCTCAGCATC 
CAGGACCAGG GCGGCCCGCT GATCGCCGAG GGAGTCGCCG AGATCTCCAC CGCCAGTGGC 
TACCGGGTGG AGGGTGTCGC CGGCACCCGC GAAGGCGCCC ATCCCAACAT CGGCCAGGCC 
CTGCGCATGA TCGGCAACCC GGGGCGTGAC GGGCGTGTGC CGGTGCGTAT CAACGGCAGG 
TTCTGA 

 

Protein sequence

MKTEHTHKRR WLLWLIIGLL AYGLFLLTLL PAGLAWDQAR ARGMVPAGVE VQGITGTLWN 
GAAVRAVLPG GLQVNDLQWR ATFTSLLAMR LGWDLEARPQ GGRVAAHVAV GPGTVVLAGV 
RGDMPAAPVV APFMTWPVRV NGRLVLDLER LQLAYSGQVR EARGVLGWID AAAGIPEPLP 
LGDLRAEISD TGEGGLRLSI QDQGGPLIAE GVAEISTASG YRVEGVAGTR EGAHPNIGQA 
LRMIGNPGRD GRVPVRINGR F