Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0191 |
Symbol | |
ID | 7315700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 208661 |
End bp | 211132 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643615076 |
Product | DNA topoisomerase I |
Protein accession | YP_002512277 |
Protein GI | 220933378 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC ACCTGGTCAT CGTCGAATCC CCCGCCAAGG CCAAGACCAT CAAGAAATAC CTCGGACCCG ATTTCGAGGT GATGGCGTCC TATGGCCATG TGCGCGACCT GGTCCCCAAG GAAGGCGCCG TGGACCCGGA TCACGGCTTT CGCATGAACT ACCAGGTGAT CGACCGCAAC GAGCGGCACG TGGAAAGCAT CGTCAAGGCC CTGCGCAAGG CCGACTCCCT GCTGCTGGCC ACTGACCCTG ACCGCGAGGG TGAGGCCATC TCCTGGCACC TCTACGAGCT GCTCCGGGAA CGGGGCGTGC TGGACGCCAA GACCGTGCAG CGGGTGGTGT TCTACGAGAT CACCCAGCGC GCCGTGAAGG AGGCCATCGA GCAGCCCCGC GGCCTGTCCT TCGACCTGAT CAACGCCCAG CAGGCGCGCC GCGCCCTGGA CTACCTGGTG GGCTTCAAGC TCTCTCCGCT GCTGTGGAAG AAGATCAAGC GCGGCCTGTC CGCCGGCCGT GTGCAGAGCC CCGCCCTGCG CATGATCGTG GAGCGCGAGG AAGAGATCGA ACGCTTCCAG ACCCGCGAGT ACTGGACCCT CGAGGCGGAC CTCGACAAGT CCGGCCAGGC CTTCAACGCC AAGCTGCACA CCCTGGACGG CAAAAAGCTC GACCAGTTCG ACATCGCCGA CGAGGTCACC GCCAGCGCCG CCCGCAACAC CCTGCTGTCC GCCGCCGACG GCAGGCTGCG CGTGGCGCGC ATCGAGAAGA AACAGCGCCG GCGCAACCCG GCGCCGCCGT TCACCACCTC TACCCTGCAA CAGGAGGCGG TGCGCAAGCT GGGCTTCTCT GCCAGCCGCG CCATGCGCGT GGCACAGCAG CTCTACGAGG GCATCGACCT GGGCGCCGGA CCCATCGGCC TGATCACCTA CATGCGTACC GACTCGGTGA CCCTGGCCGG CGAGGCCATC GCCGAGATCC GCAGGCTGAT CGAGCAGCGC TACGGCCGCA ACACACTCCC CGAGCACCCG CGCCAGTACA AGACCAAGGC CAAGAACGCC CAGGAGGCCC ACGAGGCCGT CCGCCCCACC TCGGTGATGC GCGCCCCCGA GGAGGTCAAG CGCCACCTGA CCACAGACCA GTTCAAGCTT TACGACCTGA TCTGGAAGCG CACCGTGGCC TGCCAGATGC AGCATGCCAC CCTGGACACC GTGTCCGCGG ACCTCGCCGC CGGCAGCGAA CGCCACCTGT TCCGCGCCTC CGGCTCCTCG GTACGCGACC CCGGCTTCAT GGCCGTCTAC CAGGAGGGCA AGGACGACGC CAAGGAAGAA AGCGACGAGC GCATCCTGCC ACCGCTCGAG GAAGGCGACA TCGTCAAGCT CGAGGCCCTG CGTGCCGAAC AGCACTTCAC AGAACCGCCG CCCCGCTACA CCGAGGCCAG CCTGGTGAAG GCCCTGGAGG AATACGGCAT CGGCCGCCCC TCCACCTACG CCAGCATCAT CTCCACCCTG CAACAGCGGG AATATGTGGA GATGGACAGC CGGCGCTTCA TCCCCACCGA CATCGGGCGC ATCGTCAACG CCTTCCTGAC CCAGCACTTC ACCCAGTACG TGGACTACGA CTTCACCGCC CGCCTGGAAG ACGAGTTGGA CGAGATCTCC CGCGGCGAGA AGGAATGGGT GCCGGTGATG GAGGGATTCT GGTCCTCCTT CAAGGAACAG ATCGAGGAGA AGGAAGCCAC CGTGACCCGC GCCGAGGCGG TGCAGTCCCG GGAACTGGGC ATCGACCCCA AGAGCGGGCG ACCGGTGAGC GTGCGCATGG GCCGTTACGG ACCCGTGGTG CAGATCGGCA CCAAGGACGA CGAGGAGAAG CCCCGCTTCG CCGGCCTGCC GCCGGGCAAG AAGATGGACG CGGTCACCCT GGAAGAGGCC CTGGAGCTGT TCAAGCTACC CCGGGAGCTG GGCGAGACCC CGGAAGGGGA GCCGGTGTCG GTCAACATCG GCCGTTTCGG CCCCTACGTG AAGTTCGGCA GCCGCTACGC CTCCCTCAAG CCCGAGGACG ACCCCTTCAG TATCGAACTG CCCCGTGCCC TGGAGCTGGT GGCCGAGAAG AAGGAAGCGG ATGCCAACAA GTACATCCGG GTGTTCGACG AGGCGGGCGT ACAGGTGGTC AACGGCCGCT ACGGCCCCTA CATCACCGAC GGCAACAAGA ACGCGCGCAT CCCCAAGGAT CGTGATCCCA AGAGCCTGAC CCTGGAAGAA TGCCAGGCGC TGCTCGCCGC CGCCCCCGAA CGCAAGGGCC GGCGCGGCGT GAAGAAAGCG GCGCCGAAGA AAAAGGCCGC GGCGCCCAAG AAGGCCGCCC CGAAGAAGAA AGCGGCGCCC AGGAAAAAGG CGACCGCCAA GAAGAAAGCC GCACCCAAGA AGGCCGCCGC GAAGAAAAAC GCCACTTCCG GTGGCGAGTC CGGGGCCGGG TTGACCCGCT AA
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Protein sequence | MSKHLVIVES PAKAKTIKKY LGPDFEVMAS YGHVRDLVPK EGAVDPDHGF RMNYQVIDRN ERHVESIVKA LRKADSLLLA TDPDREGEAI SWHLYELLRE RGVLDAKTVQ RVVFYEITQR AVKEAIEQPR GLSFDLINAQ QARRALDYLV GFKLSPLLWK KIKRGLSAGR VQSPALRMIV EREEEIERFQ TREYWTLEAD LDKSGQAFNA KLHTLDGKKL DQFDIADEVT ASAARNTLLS AADGRLRVAR IEKKQRRRNP APPFTTSTLQ QEAVRKLGFS ASRAMRVAQQ LYEGIDLGAG PIGLITYMRT DSVTLAGEAI AEIRRLIEQR YGRNTLPEHP RQYKTKAKNA QEAHEAVRPT SVMRAPEEVK RHLTTDQFKL YDLIWKRTVA CQMQHATLDT VSADLAAGSE RHLFRASGSS VRDPGFMAVY QEGKDDAKEE SDERILPPLE EGDIVKLEAL RAEQHFTEPP PRYTEASLVK ALEEYGIGRP STYASIISTL QQREYVEMDS RRFIPTDIGR IVNAFLTQHF TQYVDYDFTA RLEDELDEIS RGEKEWVPVM EGFWSSFKEQ IEEKEATVTR AEAVQSRELG IDPKSGRPVS VRMGRYGPVV QIGTKDDEEK PRFAGLPPGK KMDAVTLEEA LELFKLPREL GETPEGEPVS VNIGRFGPYV KFGSRYASLK PEDDPFSIEL PRALELVAEK KEADANKYIR VFDEAGVQVV NGRYGPYITD GNKNARIPKD RDPKSLTLEE CQALLAAAPE RKGRRGVKKA APKKKAAAPK KAAPKKKAAP RKKATAKKKA APKKAAAKKN ATSGGESGAG LTR
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