Gene Tgr7_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0159 
Symbol 
ID7316736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp176197 
End bp176961 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID643615044 
Producthypothetical protein 
Protein accessionYP_002512245 
Protein GI220933346 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0669306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATCT GGTCCCGCAC CCGCGGCGGC ACCCGCTACG AGGTGCGCAC CGCCGGCCGG 
GTGCACCGGC TCTACACCGA CGGCATCTTC CACAGCCAGG CCCATCCCGA ACGGCTGGCC
ACCGGCCACC TCTGGGACCT GTTCAGTCTG CCCGTGCTGC TGCGCCGTGA CCCCGTGATC
GGGCGCGCGC TGGTGCTCGG CGTGGGCGGC GGCACCGCCC TGCGCCAGCT GCGCGGCCTG
GGGGCAGAAA GCGTCGACGG CGTGGAACTG GATCCTATGC ATCTGCGCAT TGCCCGGTGT
TTCTTCGGCC TCACCGGACC CGGCATCCGC CTGCACCGGG CCGACGCCCG GGACTGGCTC
GCCCGGCACC GGGGCCCGAA GTTCGACTAC CTGGTGGACG ATCTGTTTGG CGGCGAGGAC
GGCGAACCCC GTCGGGCCAT CCCCGTGGAT GGCCCCTGGG TCCGGCAGCT GCTGCGTCAC
CTGGCCCCGG GCGGCACCCT GGTGATCAAT TTCCCCGGGG TCTGCGAACT GCAGGCCTGC
GCCCTGCTGC GGCAAGCGAC CCTGCGGCAG CGCTTCTCCA GAGCCTGGAT GCTGCAGCAC
CCCCGCTACG ACAACGCCGT GGGCGTATTT CTGCAGGACG CCCTGACCGC CCGGGGCTAC
CGCCAGCGCC TCGCCCGCCT GCCCGCCGGG CATCCGGCCC GGGGGCTCGC CCGCACCCCG
GTGCGGCTGC GCCGCCTGGA GCCTGTCGGA CTTAGGTGCC CGTAG
 
Protein sequence
MLIWSRTRGG TRYEVRTAGR VHRLYTDGIF HSQAHPERLA TGHLWDLFSL PVLLRRDPVI 
GRALVLGVGG GTALRQLRGL GAESVDGVEL DPMHLRIARC FFGLTGPGIR LHRADARDWL
ARHRGPKFDY LVDDLFGGED GEPRRAIPVD GPWVRQLLRH LAPGGTLVIN FPGVCELQAC
ALLRQATLRQ RFSRAWMLQH PRYDNAVGVF LQDALTARGY RQRLARLPAG HPARGLARTP
VRLRRLEPVG LRCP