Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3104 |
Symbol | |
ID | 3581372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3628986 |
End bp | 3630869 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637686841 |
Product | virulence factor MVIN-like |
Protein accession | YP_291160 |
Protein GI | 72163503 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAGAG CGCTGAAGAG GCCCGTTCCT GACCAGAGGC CGCGGTCTTC TACCCTGAAC TTCTGTTTCG ACGAGACCTT CCCACACGAC ATCTCGGCGC CGACGGGCGT GCCGTCGGCG CTATCGAAAG GAGCCACGCC GGTGGCGACC GACATCAGCA GCGCCAGCGA CGACCACACG GGCGGCCCTG CCAAGGACGC GGGGTCCCCT TCCCCCCACG CCGATTCGGC TGCCCCGCAG GCGGAGCAGG ACTCCACCGC CACGCCGGGC GGCATGATGC GCTCCAGCAT GGTCATGGCG GTCGGGACGA TGGTGTCTCG GGTCACCGGG TTCTTCCGTA CCGTCGTGCT CGCTGCAGCG CTGGGCACAC AGCTGCTCGG TGACGCCTAC AACGTCGCCA ACACGATCCC GTTCATCATC AACGACCTGC TCATCGGCGG TCTGATGGCG AGCGTGATCG TGCCGTTCCT GGTGCGGCGG CGCAAACGGG ACGCCGACGG CGGCAAGGCC ACGGAGGACC GCCTGTTCAC CAGTGCTGTC CTGGTGCTGC TGGTGGTGAC AGTGGCGGCG ATCCTGCTCG CGCGGCCGCT GATCCAGCTT TACGCGAGCG ACTTCCTGCC TGCGCAGGCC GAGGTGTCGG TCTACCTGGC GCGTTTCCTG CTCGCCCAGG TGTTCTTCGT CGGGATGAGC GGTCTCATCA GCGCCATGCT CAACACCCGG GGCAAGTTCG GCGCTCCGGT ATGGGCCCCT GTGCTCAACA ACCTGGTGAT CATCGCCGTC GGGGTGCTGT TCCTCATGGT GGGCACCGGA AGCACAGTGG AGACGGTGAC CACCGCCGAC AAGATCCTGT TGGGCGCGGG CACGAGCTGC GGCATGGTGC TGCAGACGGT GGTGCTGCTG GGCTCGCTGT GGCGGTCGGG ATACCGGTGG CGGCCCCGGC TGGACCTGCG CGGCTCCGGG CTGGGGGAGG CCCTGCGCAC GGCCGGGTGG ATGTTCCTGT ACACGCTCAC CACCCAGTTG GGTTTCGTGA TCACCTCCCA GATCGCCACC GGGGCCAACG TGGCCGCGAA TGCGCACGGG TCAGCGGACG CGGGCGCCGG TCTCACCGCC TACAGCTACG CCTACCAGCT TTTCCAACTG CCGTACGCGA TCATCGCGGT CTCGTTGATC ACGGTGCTGC TGCCGCAGAT GAGCGCGTTC GCTGCCGACC AGCGTTGGGA CGAGGTGCGT GCCGGGTTCT CCCGTACGCT GCGAGTTTCC GCGCTGATCC TGGTGCCGCT GTCGCTGGCG ATCTCGCTGT ACGCCACGGA GATCACGGTG CTGCTGTTCG CCCACGGCAA CACCGGCGAC AGCGACGCTG CCAACATCGG TTACATCCTC ATGGTGATGT CGCTCGGCCT GCTGCCGTTC AGCGTCTTCC AGTTGATGCT GCGTGTGTTC TACGCGCTGG GCGACACCCG CACCCCCGCG TTCCTGGGGA TCGCCAACAT CGCCGTGCAC GGCGTGCTGG CGCTGACCGC GTCCTGGCTG CTGCCGCCGC ACTTCGTGGT GGTTGGCGTG GCCGGCGGGT TCATGTCCTC GTTCCTGGTG GGAGTGTTCC TCGGCGGGCT CATCCTCCGC CGCCGGCTGG GCGGTTTGGA CGGGCGCCGT ATCGCCAGCA CGCTGGTCCG GCTCTACCTG GCGACCGCAC CCAGCGTGGT TGTGGGCTGG GGCGTGCTGG TTCTGTTCCA GTCGTGGTTC GTCTCGGGGC TGGCCGTCAA CATCGGTGCG CCCGTGGTGG GCTGCCTGGC AGGGCTCCCC GTGTTCCTGG TAGCGGCCAA GCTGCTGCGG ATCGATGAGC TGAGCGCGGT GATGGAGCTC GTCAAGTCCC GGTTGCGCCG GTAA
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Protein sequence | MGRALKRPVP DQRPRSSTLN FCFDETFPHD ISAPTGVPSA LSKGATPVAT DISSASDDHT GGPAKDAGSP SPHADSAAPQ AEQDSTATPG GMMRSSMVMA VGTMVSRVTG FFRTVVLAAA LGTQLLGDAY NVANTIPFII NDLLIGGLMA SVIVPFLVRR RKRDADGGKA TEDRLFTSAV LVLLVVTVAA ILLARPLIQL YASDFLPAQA EVSVYLARFL LAQVFFVGMS GLISAMLNTR GKFGAPVWAP VLNNLVIIAV GVLFLMVGTG STVETVTTAD KILLGAGTSC GMVLQTVVLL GSLWRSGYRW RPRLDLRGSG LGEALRTAGW MFLYTLTTQL GFVITSQIAT GANVAANAHG SADAGAGLTA YSYAYQLFQL PYAIIAVSLI TVLLPQMSAF AADQRWDEVR AGFSRTLRVS ALILVPLSLA ISLYATEITV LLFAHGNTGD SDAANIGYIL MVMSLGLLPF SVFQLMLRVF YALGDTRTPA FLGIANIAVH GVLALTASWL LPPHFVVVGV AGGFMSSFLV GVFLGGLILR RRLGGLDGRR IASTLVRLYL ATAPSVVVGW GVLVLFQSWF VSGLAVNIGA PVVGCLAGLP VFLVAAKLLR IDELSAVMEL VKSRLRR
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